RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
PTCH1-226ENST00000553011 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
PTCH1-226ENST00000553011 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ARPC1BO15143 372 aaKnown RBP11.07□□□□□ -0.64
PTCH1-226ENST00000553011 PGLYRP1O75594 196 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF735P0CB33 412 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-226ENST00000553011 VDAC1P21796 283 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 UCP3P55916 312 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 GNB1P62873 340 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF79Q15937 498 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ECSCRQ19T08 205 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 MRGPRG-AS1Q2M3A8 158 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 PYDC2Q56P42 97 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF562Q6V9R5 426 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 LCNL1Q6ZST4 164 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 RSRP1Q9BUV0 290 aa11.07□□□□□ -0.64
PTCH1-226ENST00000553011 ANKRD20A5PA0PJZ0 165 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 OPN1MWP04001 364 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 AKAIN1P0CW23 69 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 PGAM2P15259 253 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 PPP5CP53041 499 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 FXYD3Q14802 87 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 SCGB2B2Q4G0G5 96 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 LPCAT3Q6P1A2 487 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 CMTM1Q8IZ96 169 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 TEX45Q8NA69 505 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 THAP7Q9BT49 309 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
PTCH1-226ENST00000553011 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-226ENST00000553011 A6NHS1 94 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 CNIH1O95406 144 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 IGHG4P01861 327 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 RPLP1P05386 114 aaKnown RBP11.05□□□□□ -0.64
PTCH1-226ENST00000553011 PI3P19957 117 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 ETV6P41212 452 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 FOXE3Q13461 319 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 MEF2DQ14814 521 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 PRSS8Q16651 343 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 C19orf54Q5BKX5 351 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 SPANXN2Q5MJ10 180 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 TREML4Q6UXN2 200 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 SSX9Q7RTT3 188 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 SLC38A6Q8IZM9 456 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 COMMD1Q8N668 190 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 TERB2Q8NHR7 220 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 TRIM63Q969Q1 353 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 MRGPRFQ96AM1 343 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF430Q9H8G1 570 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-226ENST00000553011 NUBP2Q9Y5Y2 271 aa11.05□□□□□ -0.64
PTCH1-226ENST00000553011 DISC1C4P0D8 188 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 SOX15O60248 233 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 OR2A4O95047 310 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 S1PR2O95136 353 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 HPRT1P00492 218 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 HRASP01112 189 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 ELANEP08246 267 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 F2RP25116 425 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTCH1-226ENST00000553011 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
PTCH1-226ENST00000553011 TNXAQ16473 311 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 CXorf66Q5JRM2 361 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-226ENST00000553011 UNQ5815/PRO19632Q6UWF5 114 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 TBC1D26Q86UD7 250 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 PUSL1Q8N0Z8 303 aaKnown RBP11.04□□□□□ -0.64
PTCH1-226ENST00000553011 Q8N402 240 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 POC5Q8NA72 575 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 MARCH1Q8TCQ1 289 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 R3HDM4Q96D70 268 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 RHOVQ96L33 236 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 OR2A7Q96R45 310 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 SLC2A9Q9NRM0 540 aa11.04□□□□□ -0.64
PTCH1-226ENST00000553011 A0A1W2PN81 502 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 IGLV1-40P01703 118 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 RPA2P15927 270 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 PSMB8P28062 276 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 S100GP29377 79 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 CHRNA7P36544 502 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 LPAR6P43657 344 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-226ENST00000553011 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
PTCH1-226ENST00000553011 RNF152Q8N8N0 203 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms