RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 A6NDX4 124 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 CLDN34H7C241 214 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 FGF16O43320 207 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 CRYZL1O95825 349 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 SERPINE2P07093 398 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 TRAPPC2P0DI81 140 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 TRAPPC2BP0DI82 140 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 VAMP1P23763 118 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 RAB25P57735 213 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 UBE2KP61086 200 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 CBX3Q13185 183 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 IL15RAQ13261 267 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 SP6Q3SY56 376 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 OR52B4Q8NGK2 314 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 VSTM2AQ8TAG5 236 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 ASB13Q8WXK3 278 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 RBM14Q96PK6 669 aaKnown RBP7.66□□□□□ -1.18
LIMA1-211ENST00000552338 TSNAXQ99598 290 aaKnown RBP7.66□□□□□ -1.18
LIMA1-211ENST00000552338 SSX3Q99909 188 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 OR51J1Q9H342 316 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 CACFD1Q9UGQ2 172 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 PITPNC1Q9UKF7 332 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 TCF19Q9Y242 345 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 MMP24Q9Y5R2 645 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 HIVEP1P15822 2718 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
LIMA1-211ENST00000552338 IGHV3OR16-10A0A075B7F0 116 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 A0A1B0GU03 582 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 MARCH11A6NNE9 402 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 PITX3O75364 302 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 OR2F2O95006 317 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 S1PR2O95136 353 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 IGKV1D-33P01593 117 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 IGKV1-33P01594 117 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 IGKV1-5P01602 117 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SNRNP70P08621 437 aaKnown RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SULT1A3P0DMM9 295 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SULT1A4P0DMN0 295 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SONP18583 2426 aaKnown RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 RPL15P61313 204 aaKnown RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SLC9A3R2Q15599 337 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 PDLIM3Q53GG5 364 aaPredicted RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 ZNF429Q86V71 674 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 ZNF695Q8IW36 515 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 FAM71E2Q8N5Q1 922 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SLC35G3Q8N808 338 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 TMEM167AQ8TBQ9 72 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SSMEM1Q8WWF3 244 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 R3HDM4Q96D70 268 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 RHOVQ96L33 236 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 BEX2Q9BXY8 128 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 GSX1Q9H4S2 264 aaPredicted RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 BEX1Q9HBH7 125 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 CELSR1Q9NYQ6 3014 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 C1RLQ9NZP8 487 aa7.65□□□□□ -1.18
LIMA1-211ENST00000552338 SOX21Q9Y651 276 aaPredicted RBP7.65□□□□□ -1.18
LIMA1-211ENST00000552338 HMX3A6NHT5 357 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 M0QZK8 103 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 RRHO14718 337 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 SHOXO15266 292 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 CRLF1O75462 422 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 OR2A4O95047 310 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 FAM157CP0CG43 387 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 MAS1LP35410 378 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 RRAS2P62070 204 aaPredicted RBP7.64□□□□□ -1.19
LIMA1-211ENST00000552338 RPS16P62249 146 aaKnown RBP7.64□□□□□ -1.19
LIMA1-211ENST00000552338 PSG5Q15238 335 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 TMEM268Q5VZI3 342 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 LYZL2Q7Z4W2 148 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 FOXRED2Q8IWF2 684 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 Q8N9W7 124 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 CASTOR1Q8WTX7 329 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 RITA1Q96K30 269 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 HARBI1Q96MB7 349 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 OR2A7Q96R45 310 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 SIGLEC9Q9Y336 463 aa7.64□□□□□ -1.19
LIMA1-211ENST00000552338 IGHV3-72A0A0B4J1Y9 119 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 A0A0G2JRQ6 117 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 INS-IGF2F8WCM5 200 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 H3BUX3 64 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 H7C2Y5 167 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 UPK2O00526 184 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 NBR2O15453 112 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 KBTBD11O94819 623 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 SAA1P0DJI8 122 aaPredicted RBP7.63□□□□□ -1.19
LIMA1-211ENST00000552338 TMEM11P17152 192 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 SRD5A1P18405 259 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 SRP14P37108 136 aaKnown RBP7.63□□□□□ -1.19
LIMA1-211ENST00000552338 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
LIMA1-211ENST00000552338 F2RL1P55085 397 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 CYCSP99999 105 aaKnown RBP7.63□□□□□ -1.19
LIMA1-211ENST00000552338 RELBQ01201 579 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 ID3Q02535 119 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 C5orf64Q2M2E5 130 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 VMA21Q3ZAQ7 101 aa7.63□□□□□ -1.19
LIMA1-211ENST00000552338 FBLN7Q53RD9 439 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms