RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 K7EN84 100 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF593O00488 134 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 PHOX2AO14813 284 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 NPFFO15130 113 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 TCAPO15273 167 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SEMA3DO95025 777 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SNAP29O95721 258 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 IGF2P01344 180 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF3P17036 446 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 IGFBP3P17936 291 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SERPINB1P30740 379 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 MPIP34949 423 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 CRATP43155 626 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 PSMB2P49721 201 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SYNJ2BPP57105 145 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 RAB25P57735 213 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 CACNG7P62955 275 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 ELF3P78545 371 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 IFITM3Q01628 133 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 RPL18AQ02543 176 aaKnown RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 C2orf80Q0P641 193 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 FLOT2Q14254 428 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 FAM27D1Q5T7N8 215 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 Q6ZR03 302 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 RPS27LQ71UM5 84 aaKnown RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 Q8N9W7 124 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SUMF2Q8NBJ7 301 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 NPBQ8NG41 125 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 OR10AD1Q8NGE0 317 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 C16orf78Q8WTQ4 265 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 CDS1Q92903 461 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 ADTRPQ96IZ2 230 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 RDH12Q96NR8 316 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SERPINI1Q99574 410 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 TEAD3Q99594 435 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 HSD17B10Q99714 261 aaKnown RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 C7orf50Q9BRJ6 194 aaKnown RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 RRAGDQ9NQL2 400 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 ACER3Q9NUN7 267 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 OPTCQ9UBM4 332 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 POFUT2Q9Y2G5 429 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 TSSC4Q9Y5U2 329 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 F11RQ9Y624 299 aaKnown RBP2.63□□□□□ -1.99
LIMA1-208ENST00000551691 URGCP-MRPS24S4R325 110 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 SORL1Q92673 2214 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 IGLV1-36A0A0B4J1U3 117 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 IGHV3-74A0A0B4J1X5 117 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 IGHV3OR16-9A0A0B4J2B5 98 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 FAM240AA0A1B0GVK7 77 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 A0A1W2PQD3 144 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 RPL36A-HNRNPH2H7BZ11 118 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 TOR1AO14656 332 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 SCN2BO60939 215 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 BRI3O95415 125 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 PDYNP01213 254 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 GIG44P09565 113 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 RCC1P18754 421 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 GATA2P23769 480 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 DTYMKP23919 212 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 CNTFRP26992 372 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 GNRHRP30968 328 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 KDELR2P33947 212 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 SSTR5P35346 364 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 CXCL5P42830 114 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 ERFP50548 548 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF138P52744 262 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR12D2P58182 307 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 MTPNP58546 118 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 RAP1AP62834 184 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 PSPHP78330 225 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 BNIP2Q12982 314 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 DYNC1I2Q13409 638 aaKnown RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 NAB1Q13506 487 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 KIR2DS1Q14954 304 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 C9orf129Q5T035 196 aaKnown RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 IDNKQ5T6J7 187 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 PAGE2Q7Z2X7 111 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 Q8N2B8 174 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 MMGT1Q8N4V1 131 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 Q8N7P7 452 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 SLC30A7Q8NEW0 376 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR2Z1Q8NG97 314 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR10W1Q8NGF6 305 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR8B3Q8NGG8 313 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR10G4Q8NGN3 311 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 CDC26Q8NHZ8 85 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 SLC25A40Q8TBP6 338 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 FAM45AQ8TCE6 357 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 ZFAND1Q8TCF1 268 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 CCDC42Q96M95 316 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR8B2Q96RD0 313 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 PDCD1LG2Q9BQ51 273 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 EMC6Q9BV81 110 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 EBPLQ9BY08 206 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 YTHDF1Q9BYJ9 559 aaKnown RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 OR2J1Q9GZK6 312 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms