RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CFHR4Q92496 578 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 HARBI1Q96MB7 349 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 SNAPC5O75971 98 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 LY86O95711 162 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1-5P01602 117 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 PET100P0DJ07 73 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 G6PCP35575 357 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 H2BFSP57053 126 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 UBE2KP61086 200 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 SMCO1Q147U7 214 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 BRD3OSQ6XYD6 125 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 TCTE3Q8IZS6 198 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 TEX45Q8NA69 505 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 RANBP3Q9H6Z4 567 aaPredicted RBP8.37□□□□□ -1.07
NEK3-203ENST00000551355 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
NEK3-203ENST00000551355 FKBP11Q9NYL4 201 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 BET1LQ9NYM9 111 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 C1RLQ9NZP8 487 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 YLPM1P49750 1951 aaKnown RBP8.37□□□□□ -1.07
NEK3-203ENST00000551355 CREBBPQ92793 2442 aa8.37□□□□□ -1.07
NEK3-203ENST00000551355 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 NBPF19A0A087WUL8 3843 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 CCSO14618 274 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 P0C879 139 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 CD99P14209 185 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 CD83Q01151 205 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 HES1Q14469 280 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 ZNF429Q86V71 674 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 FOXRED2Q8IWF2 684 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
NEK3-203ENST00000551355 DYNAPQ8N1N2 210 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
NEK3-203ENST00000551355 NPBQ8NG41 125 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 OR4A16Q8NH70 328 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 OR1S1Q8NH92 325 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 GPR146Q96CH1 333 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 FYTTD1Q96QD9 318 aaKnown RBP8.36□□□□□ -1.07
NEK3-203ENST00000551355 NEURL2Q9BR09 285 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 TMEM140Q9NV12 185 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 GSKIPQ9P0R6 139 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 KIAA1456Q9P272 454 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 PITPNC1Q9UKF7 332 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 PRNDQ9UKY0 176 aa8.36□□□□□ -1.07
NEK3-203ENST00000551355 ASH1LQ9NR48 2969 aaKnown RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 PITX3O75364 302 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 RBMXL2O75526 392 aaKnown RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 MED6O75586 246 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 KBTBD11O94819 623 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 SIX6O95475 246 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 RLN2P04090 185 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 SNRNP70P08621 437 aaKnown RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 IL6RP08887 468 aaPredicted RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 TMEM11P17152 192 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 MAS1LP35410 378 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 SRP14P37108 136 aaKnown RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 KRTAP1-1Q07627 177 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 AARDQ4LEZ3 155 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 OR2T35Q8NGX2 323 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 OR52E5Q8NH55 327 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 C17orf50Q8WW18 174 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 EAF1Q96JC9 268 aaPredicted RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 ST6GAL2Q96JF0 529 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 CHIAQ9BZP6 476 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 PRDM13Q9H4Q3 707 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 RANGRFQ9HD47 186 aaPredicted RBP8.35□□□□□ -1.07
NEK3-203ENST00000551355 CACNG5Q9UF02 275 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 CCDC168Q8NDH2 2452 aa8.35□□□□□ -1.07
NEK3-203ENST00000551355 BTBD17A6NE02 478 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 SRRM4A7MD48 611 aaKnown RBP8.34□□□□□ -1.07
NEK3-203ENST00000551355 MPTX1A8MV57 137 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 M0QZK8 103 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 UPK2O00526 184 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 RRHO14718 337 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 NBR2O15453 112 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 ST8SIA3O43173 380 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 NDUFA3O95167 84 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 IGLV2-23P01705 113 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 SAA1P0DJI8 122 aaPredicted RBP8.34□□□□□ -1.07
NEK3-203ENST00000551355 PSMB6P28072 239 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 NKX2-1P43699 371 aaPredicted RBP8.34□□□□□ -1.07
NEK3-203ENST00000551355 ID3Q02535 119 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms