RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZNF343Q6P1L6 599 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 LINC00322Q6ZN03 302 aaPredicted RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 DHRSXQ8N5I4 330 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 ADAD2Q8NCV1 583 aaKnown RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 OR6M1Q8NGM8 313 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 KCNG3Q8TAE7 436 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 ACOT12Q8WYK0 555 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 MYCBPQ99417 103 aaPredicted RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 TSNAXQ99598 290 aaKnown RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 UQCC2Q9BRT2 126 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 TM2D1Q9BX74 207 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 PLGRKTQ9HBL7 147 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 RAB9BQ9NP90 201 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 VPS13DQ5THJ4 4388 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM272A0A1B0GTI8 110 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 OR11H12B2RN74 326 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 TRDCB7Z8K6 153 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 MPPED1O15442 326 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM127O75204 238 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 APOA2P02652 100 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 IFNA6P05013 189 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 PTHLHP12272 177 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 ZP3P21754 424 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 CD40LGP29965 261 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 RPL30P62888 115 aaKnown RBP5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 RCN1Q15293 331 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 MED22Q15528 200 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 RNF151Q2KHN1 245 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 C2orf76Q3KRA6 126 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 HSD17B12Q53GQ0 312 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 LY6G6FQ5SQ64 297 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 RNLSQ5VYX0 342 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 GLT8D1Q68CQ7 371 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 PYHIN1Q6K0P9 492 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 GTSCR1Q86UQ5 136 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 TCTEX1D1Q8N7M0 179 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 CMSS1Q9BQ75 279 aaKnown RBP5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 SLA2Q9H6Q3 261 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF430Q9H8G1 570 aaPredicted RBP5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 UBQLN2Q9UHD9 624 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 LSM2Q9Y333 95 aaKnown RBP5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 DMRT1Q9Y5R6 373 aa5.13□□□□□ -1.59
PRPF40B-214ENST00000551320 IGHV3-21A0A0B4J1V1 117 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 A0A0J9YWU9 116 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF320A2RRD8 509 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 CXorf65A6NEN9 183 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 C2orf70A6NJV1 201 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 A8MZ25 164 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 H0Y980 276 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FABP7O15540 132 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 RBBP9O75884 186 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 JTBO76095 146 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 TPPPO94811 219 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 NDUFB8O95169 186 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 CDK1P06493 297 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 UCHL1P09936 223 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 OR9G9P0C7N8 305 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 SAA1P0DJI8 122 aaPredicted RBP5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FOLR2P14207 255 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 AREGP15514 252 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 RPA2P15927 270 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 LGALS7P47929 136 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 TAS2R43P59537 309 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FABP5Q01469 135 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 ATP5G2Q06055 141 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 RAB11BQ15907 218 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 PRSS8Q16651 343 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 DEFB114Q30KQ6 69 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 LCN12Q6JVE5 192 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 CLEC19AQ6UXS0 136 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 SSX9Q7RTT3 188 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF554Q86TJ5 538 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 PDPNQ86YL7 162 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 CDH26Q8IXH8 852 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 C8orf59Q8N0T1 100 aaPredicted RBP5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 NKAIN3Q8N8D7 197 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 SETD9Q8NE22 299 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 DYNLRB2Q8TF09 96 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 SRSF12Q8WXF0 261 aaKnown RBP5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FAM3DQ96BQ1 224 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FYTTD1Q96QD9 318 aaKnown RBP5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 OVOL2Q9BRP0 275 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 DCUN1D5Q9BTE7 237 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 C12orf4Q9NQ89 552 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 FKBP14Q9NWM8 211 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 NKX1-2Q9UD57 310 aaPredicted RBP5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 MLXQ9UH92 298 aa5.12□□□□□ -1.59
PRPF40B-214ENST00000551320 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TRBV6-6A0A0A6YYG2 114 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TRAV3A0A0B4J244 114 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 IGKV1D-13A0A0B4J2D9 117 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 A0A0G2JLM5 398 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 IRGMA1A4Y4 181 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TNFSF12O43508 249 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 DENRO43583 198 aaKnown RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF207O43670 478 aaKnown RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 FCGR3BO75015 233 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TUSC2O75896 110 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 S1PR2O95136 353 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms