RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ZNF701M0R085 212 aaPredicted RBP20.31■□□□□ 0.84
CPSF6-205ENST00000550075 IFNA6P05013 189 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 S100GP29377 79 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 CHRNA7P36544 502 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 SSBP1Q04837 148 aaKnown RBP20.31■□□□□ 0.84
CPSF6-205ENST00000550075 IL18Q14116 193 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 AKIRIN2Q53H80 203 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 AADACL3Q5VUY0 350 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 UNQ5815/PRO19632Q6UWF5 114 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 VSTM2AQ8TAG5 236 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 AIFM2Q9BRQ8 373 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 FXYD6Q9H0Q3 95 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 KLK11Q9UBX7 282 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 NUBP2Q9Y5Y2 271 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 RBFOX2O43251 390 aaKnown RBP eCLIP20.3■□□□□ 0.84
CPSF6-205ENST00000550075 HRASP01112 189 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 SAA1P0DJI8 122 aaPredicted RBP20.3■□□□□ 0.84
CPSF6-205ENST00000550075 CD40LGP29965 261 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 CDX1P47902 265 aaPredicted RBP20.3■□□□□ 0.84
CPSF6-205ENST00000550075 C19orf54Q5BKX5 351 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 LPCAT3Q6P1A2 487 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 SPAG16Q8N0X2 631 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 OR5M8Q8NGP6 311 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 CD300LFQ8TDQ1 290 aa20.3■□□□□ 0.84
CPSF6-205ENST00000550075 FAM103A1Q9BTL3 118 aaKnown RBP20.3■□□□□ 0.84
CPSF6-205ENST00000550075 RBM38Q9H0Z9 239 aaKnown RBP20.3■□□□□ 0.84
CPSF6-205ENST00000550075 ACTL6BO94805 426 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 IGLV1-40P01703 118 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 GNRHRP30968 328 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 PRSS8Q16651 343 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 LCNL1Q6ZST4 164 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 C8orf86Q6ZUL3 223 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 LFNGQ8NES3 379 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 OR51H1Q8NH63 302 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 SMIM4Q8WVI0 70 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 GPHA2Q96T91 129 aa20.29■□□□□ 0.84
CPSF6-205ENST00000550075 M0QYG6 137 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 GPR31O00270 319 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 ARPC1BO15143 372 aaKnown RBP20.28■□□□□ 0.84
CPSF6-205ENST00000550075 EGR2P11161 476 aaPredicted RBP20.28■□□□□ 0.84
CPSF6-205ENST00000550075 CD33P20138 364 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 TAS2R19P59542 299 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 DGCR2P98153 550 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 PJVKQ0ZLH3 352 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 TNXAQ16473 311 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 MMD2Q8IY49 270 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 ARRDC1Q8N5I2 433 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 TMEM68Q96MH6 324 aa20.28■□□□□ 0.84
CPSF6-205ENST00000550075 NXF2Q9GZY0 626 aaKnown RBP20.28■□□□□ 0.84
CPSF6-205ENST00000550075 CTDSPLO15194 276 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 IDO2Q6ZQW0 420 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 TMEM229BQ8NBD8 167 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 MYOZ3Q8TDC0 251 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 C4orf3Q8WVX3 66 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 RHOVQ96L33 236 aa20.27■□□□□ 0.84
CPSF6-205ENST00000550075 CD3DP04234 171 aa20.26■□□□□ 0.83
CPSF6-205ENST00000550075 RLN1P04808 185 aa20.26■□□□□ 0.83
CPSF6-205ENST00000550075 UBE2E2Q96LR5 201 aa20.26■□□□□ 0.83
CPSF6-205ENST00000550075 PHB2Q99623 299 aa20.26■□□□□ 0.83
CPSF6-205ENST00000550075 NOTCH1P46531 2555 aa20.26■□□□□ 0.83
CPSF6-205ENST00000550075 KBTBD11O94819 623 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 OR2A4O95047 310 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 HPRT1P00492 218 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 MYCNOSP40205 109 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 RAB9AP51151 201 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 UCP3P55916 312 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 SSBP2P81877 361 aaPredicted RBP20.25■□□□□ 0.83
CPSF6-205ENST00000550075 C18orf65Q6ZTR6 163 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 SLC38A6Q8IZM9 456 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 OR2A7Q96R45 310 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 SLA2Q9H6Q3 261 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 ZNF430Q9H8G1 570 aaPredicted RBP20.25■□□□□ 0.83
CPSF6-205ENST00000550075 COMMD9Q9P000 198 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 VSIG4Q9Y279 399 aa20.25■□□□□ 0.83
CPSF6-205ENST00000550075 RAMP3O60896 148 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 PGLYRP1O75594 196 aaPredicted RBP20.24■□□□□ 0.83
CPSF6-205ENST00000550075 TNFSF8P32971 234 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 S100A5P33763 92 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 BRWD1-AS2P59051 145 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 TAS2R31P59538 309 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 ETV3LQ6ZN32 361 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 VKORC1L1Q8N0U8 176 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 SRSF12Q8WXF0 261 aaKnown RBP20.24■□□□□ 0.83
CPSF6-205ENST00000550075 TINAGL1Q9GZM7 467 aaPredicted RBP20.24■□□□□ 0.83
CPSF6-205ENST00000550075 KLK15Q9H2R5 256 aa20.24■□□□□ 0.83
CPSF6-205ENST00000550075 TNCP24821 2201 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 FABP12A6NFH5 140 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 H3BUA1 57 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 SOX15O60248 233 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 RAB3DO95716 219 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 CD74P04233 296 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 NQO2P16083 231 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 F2RP25116 425 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 MEF2DQ14814 521 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 STEAP1BQ6NZ63 245 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 PUSL1Q8N0Z8 303 aaKnown RBP20.23■□□□□ 0.83
CPSF6-205ENST00000550075 ZNF491Q8N8L2 437 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 WFDC9Q8NEX5 89 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 TMEM167AQ8TBQ9 72 aa20.23■□□□□ 0.83
CPSF6-205ENST00000550075 SPIN2AQ99865 258 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms