RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SELENOKQ9Y6D0 94 aa12.16□□□□□ -0.46
COX6A1-203ENST00000550009 SMAD5-AS1Q9Y6J3 95 aa12.16□□□□□ -0.46
COX6A1-203ENST00000550009 C13orf42A0A1B0GVH6 325 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 IZUMO1RA6ND01 250 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 DIRAS3O95661 229 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 UBE2KP61086 200 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
COX6A1-203ENST00000550009 Q8N1Y9 231 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 PHB2Q99623 299 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
COX6A1-203ENST00000550009 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
COX6A1-203ENST00000550009 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 TNFSF12O43508 249 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 CD36P16671 472 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 GNG2P59768 71 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 ZNF343Q6P1L6 599 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 KCTD9Q7L273 389 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 FCGR1BQ92637 280 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 DCUN1D5Q9BTE7 237 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 ANXA10Q9UJ72 324 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 S4R3C0 116 aa12.14□□□□□ -0.47
COX6A1-203ENST00000550009 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
COX6A1-203ENST00000550009 RRASP10301 218 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 AADACP22760 399 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 CNIH2Q6PI25 160 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 ADAMTSL5Q6ZMM2 481 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 YTHDF1Q9BYJ9 559 aaKnown RBP12.13□□□□□ -0.47
COX6A1-203ENST00000550009 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
COX6A1-203ENST00000550009 CCL28Q9NRJ3 127 aa12.13□□□□□ -0.47
COX6A1-203ENST00000550009 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
COX6A1-203ENST00000550009 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 H3BUA1 57 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 IGHV3-23P01764 117 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
COX6A1-203ENST00000550009 CSN3P07498 182 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
COX6A1-203ENST00000550009 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 CD40LGP29965 261 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 LSM3P62310 102 aaKnown RBP12.12□□□□□ -0.47
COX6A1-203ENST00000550009 DCTN2Q13561 401 aaKnown RBP12.12□□□□□ -0.47
COX6A1-203ENST00000550009 CDK10Q15131 360 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 SECTM1Q8WVN6 248 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 TCTEX1D2Q8WW35 142 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 SNAPC3Q92966 411 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 ADTRPQ96IZ2 230 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
COX6A1-203ENST00000550009 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
COX6A1-203ENST00000550009 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 BMPR1BO00238 502 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 OR2J3O76001 311 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 FCGR2CP31995 323 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 RANBP1P43487 201 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 RHOGP84095 191 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 CBX3Q13185 183 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 MFSD4AQ8N468 514 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
COX6A1-203ENST00000550009 RCHY1Q96PM5 261 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 Q9H521 79 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 HYDINQ4G0P3 5121 aa12.11□□□□□ -0.47
COX6A1-203ENST00000550009 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 A0A0G2JLM5 398 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 MPPED1O15442 326 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 REG1AP05451 166 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 AREGP15514 252 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
COX6A1-203ENST00000550009 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
COX6A1-203ENST00000550009 AUNIPQ9H7T9 357 aa12.1□□□□□ -0.47
COX6A1-203ENST00000550009 ZP3P21754 424 aa12.09□□□□□ -0.47
COX6A1-203ENST00000550009 FXYD4P59646 89 aa12.09□□□□□ -0.47
COX6A1-203ENST00000550009 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
COX6A1-203ENST00000550009 ANKRD13BQ86YJ7 626 aa12.09□□□□□ -0.47
COX6A1-203ENST00000550009 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
COX6A1-203ENST00000550009 FYTTD1Q96QD9 318 aaKnown RBP12.09□□□□□ -0.47
COX6A1-203ENST00000550009 THAP7Q9BT49 309 aaPredicted RBP12.09□□□□□ -0.47
COX6A1-203ENST00000550009 SULT1C2O00338 296 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 KBTBD11O94819 623 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 NDUFB8O95169 186 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 BRI3O95415 125 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 CTXN2P0C2S0 81 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 RPA2P15927 270 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
COX6A1-203ENST00000550009 ARL6IP1Q15041 203 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 KCTD21Q4G0X4 260 aa12.08□□□□□ -0.48
COX6A1-203ENST00000550009 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms