RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 IGHV3-43DP0DP04 118 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM41BQ5BJD5 291 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 FAM201AQ5SY85 155 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 BTNL3Q6UXE8 466 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF841Q6ZN19 808 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 HSD17B11Q8NBQ5 300 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 M0R1X1 148 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 MBP02144 154 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
RAB5B-206ENST00000549505 DLK1P80370 383 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 S100A12P80511 92 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF816Q0VGE8 651 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-206ENST00000549505 TGIF2LYQ8IUE0 185 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 LY6G5BQ8NDX9 201 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 RNASE11Q8TAA1 199 aaKnown RBP8.17□□□□□ -1.1
RAB5B-206ENST00000549505 SFT2D1Q8WV19 159 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 MUC6Q6W4X9 2439 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 DYSFO75923 2080 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 IGHV1-69-2A0A0G2JMI3 117 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 KRASP01116 189 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 EDDM3BP56851 147 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 KHDC3LQ587J8 217 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 RPL39P5Q59GN2 51 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-206ENST00000549505 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 CLDND2Q8NHS1 167 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF714Q96N38 554 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 CTSZQ9UBR2 303 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
RAB5B-206ENST00000549505 GVINP1Q7Z2Y8 2422 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 HRASP01112 189 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 CCL8P80075 99 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 PAX2Q02962 417 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM267Q0VDI3 215 aaPredicted RBP8.16□□□□□ -1.1
RAB5B-206ENST00000549505 GUCA2BQ16661 112 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 UTF1Q5T230 341 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 RAB1CQ92928 201 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM186Q96B77 213 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 P2RX4Q99571 388 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 QTRT1Q9BXR0 403 aaKnown RBP8.16□□□□□ -1.1
RAB5B-206ENST00000549505 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 DSCAMO60469 2012 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 ARID1AO14497 2285 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 MMP23AO75900 390 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 LRRC10Q5BKY1 277 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM140Q9NV12 185 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 CISD1Q9NZ45 108 aaKnown RBP8.16□□□□□ -1.1
RAB5B-206ENST00000549505 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 CNTRLQ7Z7A1 2325 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 RBFOX3A6NFN3 312 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 UPK2O00526 184 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 CCL21O00585 134 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 NDUFB3O43676 98 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 FCGR3BO75015 233 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 IAPPP10997 89 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 NDUFB7P17568 137 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 ERVK-16P61578 105 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
RAB5B-206ENST00000549505 FOLR2P14207 255 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 FHITP49789 147 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 HSPE1P61604 102 aaKnown RBP8.15□□□□□ -1.1
RAB5B-206ENST00000549505 RPL31P62899 125 aaKnown RBP8.15□□□□□ -1.1
RAB5B-206ENST00000549505 SSX2Q16385 188 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 SSX9Q7RTT3 188 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 PDPNQ86YL7 162 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 OR10P1Q8NGE3 313 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 TREM1Q9NP99 234 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 FKBP11Q9NYL4 201 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 LSM4Q9Y4Z0 139 aaKnown RBP8.15□□□□□ -1.1
RAB5B-206ENST00000549505 LOC400499M0QZD8 3231 aa8.15□□□□□ -1.1
RAB5B-206ENST00000549505 EP300Q09472 2414 aaPredicted RBP8.15□□□□□ -1.1
RAB5B-206ENST00000549505 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 ID4P47928 161 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 ICAM4Q14773 271 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 FAM213BQ8TBF2 198 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 TMEM170AQ8WVE7 144 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 BIN3Q9NQY0 253 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 FAM96BQ9Y3D0 163 aa8.15□□□□□ -1.11
RAB5B-206ENST00000549505 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
RAB5B-206ENST00000549505 RAB2AP61019 212 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 RHEBQ15382 184 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 SPANXN5Q5MJ07 72 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 OR4A47Q6IF82 309 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 BEND2Q8NDZ0 799 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 NEU4Q8WWR8 484 aaPredicted RBP8.14□□□□□ -1.11
RAB5B-206ENST00000549505 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
RAB5B-206ENST00000549505 H0YJW9 148 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms