RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CABLES2Q9BTV7 478 aa9.78□□□□□ -0.84
PTCH1-218ENST00000548945 SLIRPQ9GZT3 109 aaKnown RBP9.78□□□□□ -0.84
PTCH1-218ENST00000548945 SHISA3A0PJX4 238 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 PDCD5O14737 125 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 FABP7O15540 132 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 MRPS15P82914 257 aaKnown RBP9.77□□□□□ -0.85
PTCH1-218ENST00000548945 DYRK1AQ13627 763 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 RTL8BQ17RB0 113 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 RPEL1Q2QD12 228 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 PLAC9Q5JTB6 97 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 LINC00299Q6ZSB3 139 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 LAX1Q8IWV1 398 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 OR10J5Q8NHC4 309 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 MCFD2Q8NI22 146 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 AP3S1Q92572 193 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 OR2D2Q9H210 308 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 SDHAF2Q9NX18 166 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 COA4Q9NYJ1 87 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
PTCH1-218ENST00000548945 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 A0A0B4J203 849 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 SHOXO15266 292 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 CLEC2LP0C7M8 214 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 RAB3BP20337 219 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 PSMD7P51665 324 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 UBE2KP61086 200 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 VMA21Q3ZAQ7 101 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-218ENST00000548945 TEX45Q8NA69 505 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
PTCH1-218ENST00000548945 FAM3DQ96BQ1 224 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 ADTRPQ96IZ2 230 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
PTCH1-218ENST00000548945 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
PTCH1-218ENST00000548945 A0A075B6Q4 140 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
PTCH1-218ENST00000548945 BET1O15155 118 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 TMEM127O75204 238 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 JTBO76095 146 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 FCGR3AP08637 254 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 CD3GP09693 182 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 OR9G9P0C7N8 305 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 PRSS8Q16651 343 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 C2orf76Q3KRA6 126 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 IGSF11Q5DX21 431 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 PHB2Q99623 299 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 ADAM30Q9UKF2 790 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 RAB22AQ9UL26 194 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 KCNK7Q9Y2U2 307 aa9.75□□□□□ -0.85
PTCH1-218ENST00000548945 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
PTCH1-218ENST00000548945 TRBV9A0A0B4J1U6 114 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 IZUMO1RA6ND01 250 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 NOTOA8MTQ0 251 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 CREBL2O60519 120 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-218ENST00000548945 SFXN4Q6P4A7 337 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 Q6ZS49 121 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-218ENST00000548945 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
PTCH1-218ENST00000548945 ACOT12Q8WYK0 555 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 DDB2Q92466 427 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
PTCH1-218ENST00000548945 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 C5orf30Q96GV9 206 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 C6orf62Q9GZU0 229 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-218ENST00000548945 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 V9GY05 133 aa9.74□□□□□ -0.85
PTCH1-218ENST00000548945 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
PTCH1-218ENST00000548945 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 BMPR1BO00238 502 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
PTCH1-218ENST00000548945 TUSC2O75896 110 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 GSTT2P0CG29 244 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 GSTT2BP0CG30 244 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
PTCH1-218ENST00000548945 S100A5P33763 92 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 CLDN12P56749 244 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 OR10A3P58181 314 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 CD81P60033 236 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 RHOGP84095 191 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 DEFA5Q01523 94 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 TNXAQ16473 311 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 MZT2AQ6P582 158 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 SLC2A8Q9NY64 477 aa9.73□□□□□ -0.85
PTCH1-218ENST00000548945 ZNF230Q9UIE0 474 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-218ENST00000548945 RBM7Q9Y580 266 aaKnown RBP9.73□□□□□ -0.85
PTCH1-218ENST00000548945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.72□□□□□ -0.85
PTCH1-218ENST00000548945 MFNGO00587 321 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 MPPED1O15442 326 aa9.72□□□□□ -0.85
PTCH1-218ENST00000548945 TPPPO94811 219 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms