RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MIPP30301 263 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 AQP4P55087 323 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 EMX1Q04741 257 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 AKR1C1Q04828 323 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 PLCXD2Q0VAA5 305 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 SURF2Q15527 256 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 MOGQ16653 247 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 LFNGQ8NES3 379 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 OR5L1Q8NGL2 311 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 RAB2BQ8WUD1 216 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 MBD3L1Q8WWY6 194 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 ADAT1Q9BUB4 502 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 NSRP1Q9H0G5 558 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 MED9Q9NWA0 146 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 LRPPRCP42704 1394 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 BAZ1AQ9NRL2 1556 aaPredicted RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 NUMA1Q14980 2115 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 UNC13AQ9UPW8 1703 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 EP400Q96L91 3159 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 FREM1Q5H8C1 2179 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 SZT2Q5T011 3432 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 PTPRBP23467 1997 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 PCDH15Q96QU1 1955 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 EIF4G1Q04637 1599 aaKnown RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 CUL9Q8IWT3 2517 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 VCANP13611 3396 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 TMED7-TICAM2A0A0A6YYA0 188 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 C5orf49A4QMS7 147 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 C9JCJ5 164 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 PET100P0DJ07 73 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 SLCO1A2P46721 670 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 HIST1H4AP62805 103 aaKnown RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 PMS2P3Q13401 168 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 JOSD1Q15040 202 aaPredicted RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 C9orf64Q5T6V5 341 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 RASSF6Q6ZTQ3 369 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 SPATA24Q86W54 205 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 SYCE1Q8N0S2 351 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 RIBC1Q8N443 379 aaPredicted RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 TIPINQ9BVW5 301 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 NAT8Q9UHE5 227 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 RBM7Q9Y580 266 aaKnown RBP0.63□□□□□ -2.31
CCDC38-206ENST00000548771 KDM6BO15054 1643 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
CCDC38-206ENST00000548771 MED1Q15648 1581 aaPredicted RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 COL6A3P12111 3177 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 ERCC6Q03468 1493 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TNRC18O15417 2968 aaPredicted RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 MYOFQ9NZM1 2061 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TRAV7A0A075B6U4 112 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 A0A0D9SEW6 157 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TEX50A0A1B0GTY4 177 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TMEM269A0A1B0GVZ9 245 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 FTCDNL1E5RQL4 147 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TOX3O15405 576 aaPredicted RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 ORM1P02763 201 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 LGALS1P09382 135 aaKnown RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 RPL28P46779 137 aaKnown RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 HADHBP55084 474 aaKnown RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 RAB14P61106 215 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 FKBP1AP62942 108 aaKnown RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 HLA-DRB3P79483 266 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 EBPQ15125 230 aaKnown RBP0.62□□□□□ -2.31
CCDC38-206ENST00000548771 ELOBQ15370 118 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 Q1T7F1 81 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 LRRC75BQ2VPJ9 315 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 ARHGAP11BQ3KRB8 267 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 GPHB5Q86YW7 130 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 TMEM86AQ8N2M4 240 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 C15orf53Q8NAA6 179 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 SLC37A2Q8TED4 501 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 OR52A5Q9H2C5 316 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 CD300AQ9UGN4 299 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 MYH11P35749 1972 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 CHD5Q8TDI0 1954 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 MUC3AQ02505 3323 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 NUP160Q12769 1436 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 THSD7AQ9UPZ6 1657 aa0.62□□□□□ -2.31
CCDC38-206ENST00000548771 SNAPC4Q5SXM2 1469 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 WDR90Q96KV7 1748 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 A0A1W2PP64 1363 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 MKI67P46013 3256 aaKnown RBP0.61□□□□□ -2.31
CCDC38-206ENST00000548771 PLA2G10O15496 165 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 ATP8B1O43520 1251 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 PPBPP02775 128 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 TFPTP0C1Z6 253 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 TRGC1P0CF51 173 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 CLDN12P56749 244 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 RPL30P62888 115 aaKnown RBP0.61□□□□□ -2.31
CCDC38-206ENST00000548771 LRRC26Q2I0M4 334 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 PLPPR5Q32ZL2 321 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 SAPCD1Q5SSQ6 148 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 FAM173BQ6P4H8 233 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 ACOT12Q8WYK0 555 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 PACRGQ96M98 296 aaPredicted RBP0.61□□□□□ -2.31
CCDC38-206ENST00000548771 HES4Q9HCC6 221 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 TP53TG1Q9Y2A0 90 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 KIF13AQ9H1H9 1805 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms