RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
PTCH1-215ENST00000547672 STPG2Q8N412 459 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 ATP5SQ99766 215 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 RNF5Q99942 180 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 TMEM140Q9NV12 185 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 ONECUT1Q9UBC0 465 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 ZNF257Q9Y2Q1 563 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 ABCA4P78363 2273 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 IGHV2-26A0A0B4J1V2 119 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 RPS10-NUDT3A0A1W2PQS6 291 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 IGSF23A1L1A6 192 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 TRIM77I1YAP6 450 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 FOXH1O75593 365 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 NMBP08949 121 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 PRTN3P24158 256 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
PTCH1-215ENST00000547672 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 SLC25A24Q6NUK1 477 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
PTCH1-215ENST00000547672 C11orf42Q8N5U0 333 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 OR10P1Q8NGE3 313 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 OR5C1Q8NGR4 320 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 ST6GALNAC6Q969X2 333 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 BBC3Q96PG8 261 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-215ENST00000547672 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 PARD6GQ9BYG4 376 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-215ENST00000547672 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 BET1LQ9NYM9 111 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-215ENST00000547672 INSIG2Q9Y5U4 225 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 AUP1Q9Y679 476 aa10.97□□□□□ -0.65
PTCH1-215ENST00000547672 DOCK11Q5JSL3 2073 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 LEUTXA8MZ59 168 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 OOSP1A8MZH6 123 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 H0YJW9 148 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 BUB1B-PAK6H3BSN5 160 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 FGF16O43320 207 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 PRB1P04280 392 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 OR8U8P0C7N1 319 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 SULT1A2P50226 295 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 RAB11AP62491 216 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 HLA-DRB5Q30154 266 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 VMA21Q3ZAQ7 101 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 TMED6Q8WW62 240 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
PTCH1-215ENST00000547672 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
PTCH1-215ENST00000547672 SPENQ96T58 3664 aaKnown RBP10.96□□□□□ -0.65
PTCH1-215ENST00000547672 IGSF10Q6WRI0 2623 aa10.96□□□□□ -0.66
PTCH1-215ENST00000547672 USF3Q68DE3 2245 aa10.96□□□□□ -0.66
PTCH1-215ENST00000547672 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 A8MXK9 166 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 UPK2O00526 184 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 SOX15O60248 233 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 TSPAN9O75954 239 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 CST7O76096 145 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 LY6HO94772 140 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM50AO95807 157 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 SPP1P10451 314 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 IAPPP10997 89 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-215ENST00000547672 HTR1DP28221 377 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 DYNLT3P51808 116 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 RPS16P62249 146 aaKnown RBP10.95□□□□□ -0.66
PTCH1-215ENST00000547672 RELBQ01201 579 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 SP5Q6BEB4 398 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-215ENST00000547672 OR4A47Q6IF82 309 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 CLEC2AQ6UVW9 174 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM14EPQ6UXP3 125 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 SSX9Q7RTT3 188 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 LILRB2Q8N423 598 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 OR5B3Q8NH48 314 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 IGFBPL1Q8WX77 278 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 RPEQ96AT9 228 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 GGACTQ9BVM4 153 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 MRPL20Q9BYC9 149 aaKnown RBP10.95□□□□□ -0.66
PTCH1-215ENST00000547672 HEYLQ9NQ87 328 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-215ENST00000547672 TMEM14BQ9NUH8 114 aa10.95□□□□□ -0.66
PTCH1-215ENST00000547672 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-215ENST00000547672 TEX46H3BTG2 121 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 C1QL1O75973 258 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 KBTBD11O94819 623 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 NXPH3O95157 252 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 IL6RP08887 468 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-215ENST00000547672 OR9G9P0C7N8 305 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 PAX1P15863 534 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 LINC00205P59089 165 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 CLINT1Q14677 625 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 DPPA3Q6W0C5 159 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 EIF4E3Q8N5X7 224 aaKnown RBP10.94□□□□□ -0.66
PTCH1-215ENST00000547672 COMMD1Q8N668 190 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 TEX45Q8NA69 505 aa10.94□□□□□ -0.66
PTCH1-215ENST00000547672 FAM168AQ92567 244 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms