RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RAB9BQ9NP90 201 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 METTL1Q9UBP6 276 aaKnown RBP12.83□□□□□ -0.35
BRF1-212ENST00000547562 GAB2Q9UQC2 676 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 NQO2P16083 231 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 KIR2DS2P43631 304 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.36
BRF1-212ENST00000547562 MEF2BQ02080 365 aaPredicted RBP12.83□□□□□ -0.36
BRF1-212ENST00000547562 UTF1Q5T230 341 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 STUMQ69YW2 141 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 DUX4L9Q6RFH8 374 aaPredicted RBP12.83□□□□□ -0.36
BRF1-212ENST00000547562 VKORC1L1Q8N0U8 176 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 DDB2Q92466 427 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
BRF1-212ENST00000547562 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 HMGB3O15347 200 aaKnown RBP12.82□□□□□ -0.36
BRF1-212ENST00000547562 CD81P60033 236 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 FABP9Q0Z7S8 132 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
BRF1-212ENST00000547562 OR52E5Q8NH55 327 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 ACTR3CQ9C0K3 210 aaPredicted RBP12.82□□□□□ -0.36
BRF1-212ENST00000547562 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 SDF2L1Q9HCN8 221 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 CXCL1P09341 107 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 CCKARP32238 428 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 RELBQ01201 579 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 PDLIM3Q53GG5 364 aaPredicted RBP12.82□□□□□ -0.36
BRF1-212ENST00000547562 CT45A1Q5HYN5 189 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 CT45A3Q8NHU0 189 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 ACACAQ13085 2346 aa12.82□□□□□ -0.36
BRF1-212ENST00000547562 TRGV10A0A0A0MS01 117 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 CYB5R3P00387 301 aaPredicted RBP12.81□□□□□ -0.36
BRF1-212ENST00000547562 TNFSF4P23510 183 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 RPP30P78346 268 aaKnown RBP12.81□□□□□ -0.36
BRF1-212ENST00000547562 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
BRF1-212ENST00000547562 GAFA1Q96PS6 74 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 TMEM140Q9NV12 185 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
BRF1-212ENST00000547562 CD1BP29016 333 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 PSMB3P49720 205 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 TLE1Q04724 770 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 Q8N7P7 452 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.81□□□□□ -0.36
BRF1-212ENST00000547562 OR4S2Q8NH73 311 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
BRF1-212ENST00000547562 SAA2-SAA4A0A096LPE2 208 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 TRAV3A0A0B4J244 114 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 AP4M1O00189 453 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 IFNA10P01566 189 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 S100A8P05109 93 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 SAA2P0DJI9 122 aaPredicted RBP12.8□□□□□ -0.36
BRF1-212ENST00000547562 VDAC2P45880 294 aaPredicted RBP12.8□□□□□ -0.36
BRF1-212ENST00000547562 TCF23Q7RTU1 214 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 NUP37Q8NFH4 326 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 ZNF251Q9BRH9 671 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
BRF1-212ENST00000547562 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 TGIF2-C20orf24A0A0A6YYL0 155 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
BRF1-212ENST00000547562 A0A0G2JNJ9 132 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 CYB5BO43169 146 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
BRF1-212ENST00000547562 TMEM108Q6UXF1 575 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 ZNF788Q6ZQV5 615 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 DOLPP1Q86YN1 238 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 CCL13Q99616 98 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 SMIM7Q9BQ49 75 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 Q9UFV3 132 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 CLDN34H7C241 214 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 RRHO14718 337 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 GFRA3O60609 400 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 GYPAP02724 150 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 NBL1P41271 181 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 RND2P52198 227 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 ATMQ13315 3056 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
BRF1-212ENST00000547562 PRRG2O14669 202 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 MPDU1O75352 247 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 DEFA4P12838 97 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 CDC34P49427 236 aaPredicted RBP12.78□□□□□ -0.36
BRF1-212ENST00000547562 THBS3P49746 956 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 CYP2G1PQ6ZSU1 146 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 TGIF2LYQ8IUE0 185 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 ZNF439Q8NDP4 499 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 GATAD1Q8WUU5 269 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 GGACTQ9BVM4 153 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms