RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 AADACP22760 399 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 SDC2P34741 201 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 EIF4EBP1Q13541 118 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-204ENST00000547486 OR2B11Q5JQS5 317 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 C10orf55Q5SWW7 151 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 VKORC1L1Q8N0U8 176 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 ACOT12Q8WYK0 555 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 DCUN1D5Q9BTE7 237 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 AKIP1Q9NQ31 210 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 C19orf73Q9NVV2 129 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 RBMX2Q9Y388 322 aaKnown RBP10.17□□□□□ -0.78
CPSF6-204ENST00000547486 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
CPSF6-204ENST00000547486 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
CPSF6-204ENST00000547486 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 CTXN2P0C2S0 81 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 PTHLHP12272 177 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 MXD1Q05195 221 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 CDK10Q15131 360 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 SFXN4Q6P4A7 337 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 CNIH2Q6PI25 160 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 OR5H6Q8NGV6 325 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 GPHA2Q96T91 129 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 ANXA10Q9UJ72 324 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 SSR3Q9UNL2 185 aa10.16□□□□□ -0.78
CPSF6-204ENST00000547486 IZUMO1RA6ND01 250 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 A8MZ25 164 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 E7EUB6 86 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 MPPED1O15442 326 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 MECP2P51608 486 aaKnown RBP10.15□□□□□ -0.78
CPSF6-204ENST00000547486 GNG2P59768 71 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 RHOGP84095 191 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 C19orf35Q6ZS72 473 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 KCTD9Q7L273 389 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 TTC9CQ8N5M4 171 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 FCGR1BQ92637 280 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 TM2D3Q9BRN9 247 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 THAP7Q9BT49 309 aaPredicted RBP10.15□□□□□ -0.78
CPSF6-204ENST00000547486 YTHDF1Q9BYJ9 559 aaKnown RBP10.15□□□□□ -0.78
CPSF6-204ENST00000547486 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 PRELID3BQ9Y3B1 194 aa10.15□□□□□ -0.78
CPSF6-204ENST00000547486 A0A1B0GW64 132 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 HMX3A6NHT5 357 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 TEX22C9J3V5 150 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 BMPR1BO00238 502 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 IL6RP08887 468 aaPredicted RBP10.14□□□□□ -0.79
CPSF6-204ENST00000547486 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 RPEL1Q2QD12 228 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 MMD2Q8IY49 270 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 MFSD4AQ8N468 514 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 SNAPC3Q92966 411 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 SPIN2AQ99865 258 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 SPIN2BQ9BPZ2 258 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 SIGLEC8Q9NYZ4 499 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 SPATA2Q9UM82 520 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 DMRT1Q9Y5R6 373 aa10.14□□□□□ -0.79
CPSF6-204ENST00000547486 TNCP24821 2201 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 TRAV18A0A075B6X5 111 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.13□□□□□ -0.79
CPSF6-204ENST00000547486 FAM223BA6NKX1 122 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 H0Y980 276 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 SLC22A5O76082 557 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 ACTL6BO94805 426 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 CD36P16671 472 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
CPSF6-204ENST00000547486 IDNKQ5T6J7 187 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 FAM223AQ8IWN6 122 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 PUSL1Q8N0Z8 303 aaKnown RBP10.13□□□□□ -0.79
CPSF6-204ENST00000547486 TCTEX1D2Q8WW35 142 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 HSD17B10Q99714 261 aaKnown RBP10.13□□□□□ -0.79
CPSF6-204ENST00000547486 CCL28Q9NRJ3 127 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 TAS2R8Q9NYW2 309 aa10.13□□□□□ -0.79
CPSF6-204ENST00000547486 RYR2Q92736 4967 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 LOC100506127A0A0U1RQW1 187 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 OR2J3O76001 311 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 SCGNO76038 276 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 OR2A4O95047 310 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 FCER2P06734 321 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 MYOD1P15172 320 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 EDN2P20800 178 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 FCGR2CP31995 323 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 TATDN3Q17R31 274 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 HOGA1Q86XE5 327 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 NECAP1Q8NC96 275 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 OR4S2Q8NH73 311 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 TMEM167AQ8TBQ9 72 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 OR2A7Q96R45 310 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 Q9H521 79 aa10.12□□□□□ -0.79
CPSF6-204ENST00000547486 MRPS7Q9Y2R9 242 aaKnown RBP10.12□□□□□ -0.79
CPSF6-204ENST00000547486 PPP5D1E7EU14 171 aa10.11□□□□□ -0.79
CPSF6-204ENST00000547486 TNFSF12O43508 249 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms