RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 K7ENP7 123 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 DUTP33316 252 aaKnown RBP10.52□□□□□ -0.73
SCAF11-209ENST00000547018 TAS2R30P59541 319 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 NHLH1Q02575 133 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 RBPJQ06330 500 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF525Q8N782 197 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 LHX4Q969G2 390 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 GNPNAT1Q96EK6 184 aaPredicted RBP10.52□□□□□ -0.73
SCAF11-209ENST00000547018 LURAP1Q96LR2 239 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
SCAF11-209ENST00000547018 CDSNQ15517 529 aa10.51□□□□□ -0.73
SCAF11-209ENST00000547018 C17orf100A8MU93 164 aa10.51□□□□□ -0.73
SCAF11-209ENST00000547018 CD5P06127 495 aa10.51□□□□□ -0.73
SCAF11-209ENST00000547018 DIAPH2-AS1Q14236 149 aa10.51□□□□□ -0.73
SCAF11-209ENST00000547018 LSM10Q969L4 123 aaKnown RBP10.51□□□□□ -0.73
SCAF11-209ENST00000547018 OR6C3Q9NZP0 311 aa10.51□□□□□ -0.73
SCAF11-209ENST00000547018 TET2Q6N021 2002 aaPredicted RBP10.51□□□□□ -0.73
SCAF11-209ENST00000547018 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 ADH4P08319 380 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 NUBP1P53384 320 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 TLE4Q04727 773 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 MRGPRGQ86SM5 289 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 IL22RA2Q969J5 263 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
SCAF11-209ENST00000547018 C11orf1Q9H5F2 150 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 ABCA12Q86UK0 2595 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 USP9XQ93008 2570 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-209ENST00000547018 DUXBA0A1W2PPF3 345 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 TNFRSF1AP19438 455 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 CASP6P55212 293 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 PRR7Q8TB68 274 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
SCAF11-209ENST00000547018 SLC35B3Q9H1N7 401 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 CISD1Q9NZ45 108 aaKnown RBP10.5□□□□□ -0.73
SCAF11-209ENST00000547018 IL19Q9UHD0 177 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 RRHO14718 337 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 CRYBA1P05813 215 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 FFAR4Q5NUL3 377 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 Q8TCH9 128 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 IFI27L2Q9H2X8 130 aa10.5□□□□□ -0.73
SCAF11-209ENST00000547018 MDKP21741 143 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-209ENST00000547018 C17orf58Q2M2W7 97 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 TAF15Q92804 592 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCAF11-209ENST00000547018 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
SCAF11-209ENST00000547018 IGLV3-9A0A075B6K5 115 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 KBTBD11-OT1A0A1B0GTJ5 212 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 MAP1LC3B2A6NCE7 125 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 NPIPB11E5RHQ5 1161 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 E7EQL1 145 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 HNF1AP20823 631 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 COX7A1P24310 79 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
SCAF11-209ENST00000547018 LOXL3P58215 753 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF343Q6P1L6 599 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 MOB3BQ86TA1 216 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 OR10X1Q8NGY0 326 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 CA5BP1Q8WTZ4 195 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 MAP1LC3BQ9GZQ8 125 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 EGLN1Q9GZT9 426 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 ARV1Q9H2C2 271 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 DOPEY2Q9Y3R5 2298 aa10.49□□□□□ -0.73
SCAF11-209ENST00000547018 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 ACTL6BO94805 426 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 KPTNQ9Y664 436 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 OR8U8P0C7N1 319 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 C1QTNF9P0C862 333 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 MLANAQ16655 118 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 NECAP1Q8NC96 275 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 RAI1Q7Z5J4 1906 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-209ENST00000547018 IGHV3-21A0A0B4J1V1 117 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 VSTM5A8MXK1 200 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 RAB5CP51148 216 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 ACSM6Q6P461 480 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
SCAF11-209ENST00000547018 ENY2Q9NPA8 101 aa10.48□□□□□ -0.73
SCAF11-209ENST00000547018 CREBBPQ92793 2442 aa10.47□□□□□ -0.73
SCAF11-209ENST00000547018 NKX6-3A6NJ46 265 aa10.47□□□□□ -0.73
SCAF11-209ENST00000547018 TUBG1P23258 451 aa10.47□□□□□ -0.73
SCAF11-209ENST00000547018 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF726P1Q15940 193 aa10.47□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
SCAF11-209ENST00000547018 RNASE6Q93091 150 aaKnown RBP10.47□□□□□ -0.73
SCAF11-209ENST00000547018 WDR61Q9GZS3 305 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms