RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ITLN1Q8WWA0 313 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 SFXN3Q9BWM7 321 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 YAE1D1Q9NRH1 226 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 PPIAL4CA0A0B4J2A2 164 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 PPIAL4GP0DN37 164 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 KCNS1Q96KK3 526 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 APOHP02749 345 aaPredicted RBP8.94□□□□□ -0.98
PCDH9-204ENST00000544246 SEMA5BQ9P283 1151 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 TRAV24A0A0B4J272 114 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 M0R381 172 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 GFRA3O60609 400 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 SCTP09683 121 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 PUSL1Q8N0Z8 303 aaKnown RBP8.93□□□□□ -0.98
PCDH9-204ENST00000544246 MYO7AQ13402 2215 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 A0A0U1RQV5 110 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-204ENST00000544246 GLIPR1P48060 266 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 ZNF146Q15072 292 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 ITLN2Q8WWU7 325 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-204ENST00000544246 SH3BGRL3Q9H299 93 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 LOC105371242A0A075B767 164 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 UNC119Q13432 240 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 CLDND2Q8NHS1 167 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 DMRTA1Q5VZB9 504 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 ABHD12Q8N2K0 398 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 FGFRL1Q8N441 504 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 SSBP3Q9BWW4 388 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-204ENST00000544246 SMCHD1A6NHR9 2005 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 PLA2G10O15496 165 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 PDLIM4P50479 330 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 TNFRSF9Q07011 255 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 CENPWQ5EE01 88 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 LINC00305Q7Z4B0 112 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 HMGCLL1Q8TB92 370 aa8.93□□□□□ -0.98
PCDH9-204ENST00000544246 HTN3P15516 51 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 DCAF12L2Q5VW00 463 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM219BQ5XKK7 198 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 DNM1P46Q6ZS02 220 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A10PA6NDY2 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A18PA6NE21 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A16PA6NEW6 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A20PA6NIJ5 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A8PA6NJQ4 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A7PA6NKC0 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A22PA8MWA6 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A12PA8MX19 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A5PA8MXJ8 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A23PA8MXZ1 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 NPIPB4C9JG80 1138 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 PEX7O00628 323 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 ZG16O60844 167 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A15PP0C7V4 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A13PP0C7W8 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A14PP0C7W9 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A24PP0C7X0 464 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 WDR82Q6UXN9 313 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 HIST1H2BAQ96A08 127 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 NABP2Q9BQ15 211 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 SDF2L1Q9HCN8 221 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 SNAI2O43623 268 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 GCHFRP30047 84 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 GPR183P32249 361 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 RND3P61587 244 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 DCAF10Q5QP82 559 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 SLC25A2Q9BXI2 301 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 WNT10AQ9GZT5 417 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 FAM60AQ9NP50 221 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 COL9A1P20849 921 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 PSG4Q00888 419 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM92Q6UXU6 159 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 VKORC1L1Q8N0U8 176 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM186Q96B77 213 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 LINC01587Q99440 93 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 CCL19Q99731 98 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 GGACTQ9BVM4 153 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 CCL4P13236 92 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 PAX1P15863 534 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 CA7P43166 264 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 ZP4Q12836 540 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM42Q69YG0 159 aa8.92□□□□□ -0.98
PCDH9-204ENST00000544246 IGHV5-10-1A0A0J9YXX1 117 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 C1QL1O75973 258 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 NTN1O95631 604 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 FSTP19883 344 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM30BQ3MIR4 351 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 WDR54Q9H977 334 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 SLC17A3O00476 420 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TDGF1P3P51864 188 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 SRSF6Q13247 344 aaKnown RBP8.91□□□□□ -0.98
PCDH9-204ENST00000544246 P2RY6Q15077 328 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 ST6GALNAC3Q8NDV1 305 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 OR9G1Q8NH87 305 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 C14orf144Q96I85 54 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 ZNF385AQ96PM9 386 aaKnown RBP8.91□□□□□ -0.98
PCDH9-204ENST00000544246 CLEC7AQ9BXN2 247 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1462.4 ms