RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
GABPB1-206ENST00000543881 STUB1Q9UNE7 303 aa9.04□□□□□ -0.96
GABPB1-206ENST00000543881 IGKV1D-13A0A0B4J2D9 117 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 TMEM235A6NFC5 223 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 SSX5O60225 188 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 IGKV1-13P0DP09 117 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 ZP3P21754 424 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 SYNJ2BPP57105 145 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 RPL30P62888 115 aaKnown RBP9.03□□□□□ -0.96
GABPB1-206ENST00000543881 TNXAQ16473 311 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 SGPP2Q8IWX5 399 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 SRSF12Q8WXF0 261 aaKnown RBP9.03□□□□□ -0.96
GABPB1-206ENST00000543881 ELOVL1Q9BW60 279 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 OR51E2Q9H255 320 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
GABPB1-206ENST00000543881 DAPK2Q9UIK4 370 aa9.03□□□□□ -0.96
GABPB1-206ENST00000543881 FCGR3BO75015 233 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 HLA-DQB1P01920 261 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 PRH1P02810 166 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 IFNA6P05013 189 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 SAA1P0DJI8 122 aaPredicted RBP9.02□□□□□ -0.96
GABPB1-206ENST00000543881 AADACP22760 399 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ZNF45Q02386 682 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 EIF4EBP1Q13541 118 aaPredicted RBP9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ARL6IP1Q15041 203 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 OR2B11Q5JQS5 317 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 C10orf55Q5SWW7 151 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ANKRD13BQ86YJ7 626 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 OSR1Q8TAX0 266 aaPredicted RBP9.02□□□□□ -0.96
GABPB1-206ENST00000543881 LGALS14Q8TCE9 139 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 PHB2Q99623 299 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 CENPOQ9BU64 300 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 DCSTAMPQ9H295 470 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 RNF167Q9H6Y7 350 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ZNF430Q9H8G1 570 aaPredicted RBP9.02□□□□□ -0.96
GABPB1-206ENST00000543881 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.96
GABPB1-206ENST00000543881 OR2W1Q9Y3N9 320 aa9.02□□□□□ -0.96
GABPB1-206ENST00000543881 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 CSN3P07498 182 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 OR9G9P0C7N8 305 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 SDC2P34741 201 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 CDK10Q15131 360 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 HAGHQ16775 308 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 SFXN4Q6P4A7 337 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 CNIH2Q6PI25 160 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 TPRA1Q86W33 373 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 ACOT12Q8WYK0 555 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 FCGR1BQ92637 280 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 USMG5Q96IX5 58 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 VCX3AQ9NNX9 186 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 AKIP1Q9NQ31 210 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 SSR3Q9UNL2 185 aa9.02□□□□□ -0.97
GABPB1-206ENST00000543881 TRBV9A0A0B4J1U6 114 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 TUSC2O75896 110 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 CTXN2P0C2S0 81 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 RHOGP84095 191 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 KCTD9Q7L273 389 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 OR5H6Q8NGV6 325 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 SLC25A38Q96DW6 304 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 GPHA2Q96T91 129 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 THAP7Q9BT49 309 aaPredicted RBP9.01□□□□□ -0.97
GABPB1-206ENST00000543881 DCUN1D5Q9BTE7 237 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 RHBDL2Q9NX52 303 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 ANXA10Q9UJ72 324 aa9.01□□□□□ -0.97
GABPB1-206ENST00000543881 A0A1B0GW64 132 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 IZUMO1RA6ND01 250 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 E7EUB6 86 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 BMPR1BO00238 502 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 PTHLHP12272 177 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 GNG2P59768 71 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 MXD1Q05195 221 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 ZNF773Q6PK81 442 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 C19orf35Q6ZS72 473 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 YTHDF1Q9BYJ9 559 aaKnown RBP9□□□□□ -0.97
GABPB1-206ENST00000543881 PRELID3BQ9Y3B1 194 aa9□□□□□ -0.97
GABPB1-206ENST00000543881 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
GABPB1-206ENST00000543881 HMX3A6NHT5 357 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 TEX22C9J3V5 150 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 MPPED1O15442 326 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 CD36P16671 472 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 MECP2P51608 486 aaKnown RBP8.99□□□□□ -0.97
GABPB1-206ENST00000543881 EXOSC2Q13868 293 aaKnown RBP8.99□□□□□ -0.97
GABPB1-206ENST00000543881 RPEL1Q2QD12 228 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 MMD2Q8IY49 270 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 TTC9CQ8N5M4 171 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 GVQW1Q8N7I0 195 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 ZBTB8BQ8NAP8 495 aaPredicted RBP8.99□□□□□ -0.97
GABPB1-206ENST00000543881 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 SNAPC3Q92966 411 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 SPIN2AQ99865 258 aa8.99□□□□□ -0.97
GABPB1-206ENST00000543881 SPIN2BQ9BPZ2 258 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms