RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 RNF224P0DH78 156 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 NDUFB7P17568 137 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 KITLGP21583 273 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 ATP5G3P48201 142 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 SELENOTP62341 195 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 MZT1Q08AG7 82 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 ALKBH6Q3KRA9 238 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 C1orf194Q5T5A4 169 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 BTNL3Q6UXE8 466 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 KLF14Q8TD94 323 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-208ENST00000543633 FER1L6-AS2Q96M78 137 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
VPS33A-208ENST00000543633 OBP2BQ9NPH6 170 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 JPT1Q9UK76 154 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 A0A1B0GWJ7 208 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 NDUFB4O95168 129 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 IGHV1-2P23083 117 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 DUTP33316 252 aaKnown RBP11.42□□□□□ -0.58
VPS33A-208ENST00000543633 SOX8P57073 446 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 TLE1Q04724 770 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 WDR82Q6UXN9 313 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-208ENST00000543633 C11orf52Q96A22 123 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 GGTLC1Q9BX51 225 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-208ENST00000543633 ZDHHC11Q9H8X9 412 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 FKBP11Q9NYL4 201 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 FOXJ2Q9P0K8 574 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 ESDP10768 282 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 MPV17P39210 176 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 VDAC2P45880 294 aaPredicted RBP11.41□□□□□ -0.58
VPS33A-208ENST00000543633 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 ERVK-16P61578 105 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 FOXF2Q12947 444 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 PRAMEF5Q5TYX0 476 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 OR13A1Q8NGR1 328 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 SPRR3Q9UBC9 169 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 PSG11Q9UQ72 335 aa11.41□□□□□ -0.58
VPS33A-208ENST00000543633 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 WNT9BO14905 357 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 MT-CO2P00403 227 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 OR10J1P30954 320 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 GPR12P47775 334 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
VPS33A-208ENST00000543633 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 CLEC12BQ2HXU8 276 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 Q6ZT83 130 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 GTF3C1Q12789 2109 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 DMXL1Q9Y485 3027 aa11.4□□□□□ -0.58
VPS33A-208ENST00000543633 C9JCJ5 164 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 FNDC10F2Z333 226 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 ITGB1BP1O14713 200 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 IGKV3-15P01624 115 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 CRYAAP02489 173 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 C1QTNF9P0C862 333 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 SSTR5P35346 364 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 TIMP3P35625 211 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 EDDM3BP56851 147 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.59
VPS33A-208ENST00000543633 CR1LQ2VPA4 569 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF718Q3SXZ3 478 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 Q6ZR03 302 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 OR10G8Q8NGN5 311 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 CLCF1Q9UBD9 225 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 NAGKQ9UJ70 344 aa11.4□□□□□ -0.59
VPS33A-208ENST00000543633 PCNX2A6NKB5 2137 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 YPEL1O60688 119 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 UBE2G2P60604 165 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 TEX38Q6PEX7 206 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 PIP4P1Q86T03 277 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 TMEM178AQ8NBL3 297 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 YPEL2Q96QA6 119 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 NEU1Q99519 415 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 MGST2Q99735 147 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 SFXN3Q9BWM7 321 aa11.39□□□□□ -0.59
VPS33A-208ENST00000543633 LSM4Q9Y4Z0 139 aaKnown RBP11.39□□□□□ -0.59
VPS33A-208ENST00000543633 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 OR4A8P0C604 315 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 SELLP14151 372 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 AREGP15514 252 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 DMRTC2Q8IXT2 367 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 OR5T1Q8NG75 326 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 PPP1R35Q8TAP8 253 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 DERL1Q9BUN8 251 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 HEYLQ9NQ87 328 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms