RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 C3orf85A0A1B0GTC6 90 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 CRYM-AS1A6NIL9 109 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 IGLV2-23P01705 113 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 HLA-DRB1P01911 266 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 AMY1AP04745 511 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 SERPINE2P07093 398 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 ANXA3P12429 323 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 PI3P19957 117 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 BRWD1-AS2P59051 145 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 ERVK-16P61578 105 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 BLCAPP62952 87 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 PLGLAQ15195 96 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 TMEM128Q5BJH2 165 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 Q6ZSV7 163 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
DDX55-210ENST00000543016 OR4A5Q8NH83 315 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 GALNT14Q96FL9 552 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 RITA1Q96K30 269 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 RHOVQ96L33 236 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 NAA60Q9H7X0 242 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 METTL1Q9UBP6 276 aaKnown RBP9.68□□□□□ -0.86
DDX55-210ENST00000543016 ZNF580Q9UK33 172 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 VSIG4Q9Y279 399 aa9.68□□□□□ -0.86
DDX55-210ENST00000543016 FAM240BA0A1B0GVZ2 78 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 CLPSL1A2RUU4 121 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 RAMP3O60896 148 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 OR2A4O95047 310 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 IGHG2P01859 326 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 CRYGBP07316 175 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 UCP1P25874 307 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 BTCP35070 178 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 LPAR6P43657 344 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 COMPP49747 757 aaPredicted RBP9.67□□□□□ -0.86
DDX55-210ENST00000543016 CCR6P51684 374 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 SRPXP78539 464 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 ZNF585BQ52M93 769 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 FBLN7Q53RD9 439 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 OR2B11Q5JQS5 317 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 SLC25A42Q86VD7 318 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 PPP1R27Q86WC6 154 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 FOXRED2Q8IWF2 684 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 OR2A7Q96R45 310 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 ALX4Q9H161 411 aaPredicted RBP9.67□□□□□ -0.86
DDX55-210ENST00000543016 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 BET1LQ9NYM9 111 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 SIGLEC9Q9Y336 463 aa9.67□□□□□ -0.86
DDX55-210ENST00000543016 SRRM4A7MD48 611 aaKnown RBP9.66□□□□□ -0.86
DDX55-210ENST00000543016 SLC25A17O43808 307 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 PEX14O75381 377 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 TCRBP04435 133 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 VSIG10L2P0DP72 767 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 AKR1C4P17516 323 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 MAS1LP35410 378 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 RELBQ01201 579 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 ARSJQ5FYB0 599 aaPredicted RBP9.66□□□□□ -0.86
DDX55-210ENST00000543016 SLC35E3Q7Z769 313 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 TMED4Q7Z7H5 227 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 MMD2Q8IY49 270 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 PUSL1Q8N0Z8 303 aaKnown RBP9.66□□□□□ -0.86
DDX55-210ENST00000543016 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 ENKURQ8TC29 256 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 IL22RA2Q969J5 263 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 R3HDM4Q96D70 268 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 C19orf24Q9BVV8 132 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 TMEM222Q9H0R3 208 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
DDX55-210ENST00000543016 MARCH11A6NNE9 402 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 AP4M1O00189 453 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 ACTL6BO94805 426 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 S1PR2O95136 353 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 CDS2O95674 445 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.86
DDX55-210ENST00000543016 CNTFRP26992 372 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 VDAC2P45880 294 aaPredicted RBP9.65□□□□□ -0.86
DDX55-210ENST00000543016 SRSF2Q01130 221 aaKnown RBP9.65□□□□□ -0.86
DDX55-210ENST00000543016 IFITM3Q01628 133 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 PRSS8Q16651 343 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TRIM16LQ309B1 348 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 C9orf152Q5JTZ5 239 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 FAM219AQ8IW50 185 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.86
DDX55-210ENST00000543016 DUSP18Q8NEJ0 188 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 LINC01006Q8NI28 216 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 GLYATL2Q8WU03 294 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TMEM230Q96A57 120 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TMEM68Q96MH6 324 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TMEM56Q96MV1 263 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TP53RKQ96S44 253 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
DDX55-210ENST00000543016 IGHV7-81A0A0B4J1V7 117 aa9.64□□□□□ -0.87
DDX55-210ENST00000543016 KBTBD11O94819 623 aa9.64□□□□□ -0.87
DDX55-210ENST00000543016 IGF1P05019 195 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms