RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 GGNQ86UU5 652 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 WDFY1Q8IWB7 410 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 MBD3L1Q8WWY6 194 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 STARD4Q96DR4 205 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 HSPB9Q9BQS6 159 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 CD55P08174 381 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 BRS3P32247 399 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ARL3P36405 182 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 FOXG1P55316 489 aaPredicted RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ERVFRD-1P60508 538 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 VAMP3Q15836 100 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 SRSF7Q16629 238 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 TGIF2LYQ8IUE0 185 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 C1orf174Q8IYL3 243 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 LINC00469Q8N7U9 141 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 BLNKQ8WV28 456 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 TRAV1-1A0A0B4J248 108 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 A0A1W2PN81 502 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 CRYABP02511 175 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 CHRNB4P30926 498 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 S100A7P31151 101 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 HSPE1P61604 102 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 RPL23P62829 140 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 LCN2P80188 198 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ZFP36L1Q07352 338 aaKnown RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 PSG7Q13046 419 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 IL15RAQ13261 267 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ZNF324BQ6AW86 544 aaPredicted RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ETFRF1Q6IPR1 90 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ASCL4Q6XD76 172 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 PLPPR1Q8TBJ4 325 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 HARBI1Q96MB7 349 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 WFIKKN1Q96NZ8 548 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 TCF19Q9Y242 345 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 NEURL1O76050 574 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 CEACAM1P13688 526 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 USF1P22415 310 aaPredicted RBP6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 CSN1S1P47710 185 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 LHX2P50458 406 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 P2RY6Q15077 328 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 PQLC2Q6ZP29 291 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 FOXL2NBQ6ZUU3 175 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 SSX7Q7RTT5 188 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 VKORC1L1Q8N0U8 176 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 TMEM242Q9NWH2 141 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 A0A1B0GV90 55 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 HGFACQ04756 655 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 Q6ZN92 141 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 MOB3BQ86TA1 216 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 OR8I2Q8N0Y5 310 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 OR1L8Q8NGR8 309 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 FAM216AQ8WUB2 273 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 RND1Q92730 232 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 BCL2L2Q92843 193 aaPredicted RBP6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 SPSB4Q96A44 273 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 FLYWCH2Q96CP2 140 aaKnown RBP6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 OR2V2Q96R30 315 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 LIME1Q9H400 295 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 VSIRQ9H7M9 311 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 CBY1Q9Y3M2 126 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 TRBV24-1A0A075B6N3 115 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 MKRN2OSH3BPM6 223 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 MT-ND6P03923 174 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 CLDN18P56856 261 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 TFF3Q07654 80 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 TIPARPQ7Z3E1 657 aaKnown RBP6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 BMPERQ8N8U9 685 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 USF3Q68DE3 2245 aa6.93□□□□□ -1.3
PRKAB1-207ENST00000542698 IGKV3D-15A0A087WSY6 115 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 DIRC3C9JPN6 131 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 MFAP2P55001 183 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 LGALS4P56470 323 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 RPL31P62899 125 aaKnown RBP6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 PYY3Q5JQD4 70 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 GFI1BQ5VTD9 330 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 LYPD6Q86Y78 171 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 PDPNQ86YL7 162 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 JPT1Q9UK76 154 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 PCNX3Q9H6A9 2034 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 ABCA4P78363 2273 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 IFNL4K9M1U5 179 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 SMPD2O60906 423 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 TOX4O94842 621 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 Q6ZT83 130 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 CA5BP1Q8WTZ4 195 aa6.92□□□□□ -1.3
PRKAB1-207ENST00000542698 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms