RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 C8orf31Q8N9H6 132 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 RPS16P62249 146 aaKnown RBP18.29■□□□□ 0.52
HOMER3-204ENST00000539827 TAGLNQ01995 201 aaKnown RBP18.29■□□□□ 0.52
HOMER3-204ENST00000539827 RTL8BQ17RB0 113 aa18.29■□□□□ 0.52
HOMER3-204ENST00000539827 OR13D1Q8NGV5 346 aa18.29■□□□□ 0.52
HOMER3-204ENST00000539827 RHOVQ96L33 236 aa18.29■□□□□ 0.52
HOMER3-204ENST00000539827 IGKV1-16P04430 117 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 PXDC1Q5TGL8 231 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 OR4A47Q6IF82 309 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 TMEM14EPQ6UXP3 125 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 SAT2Q96F10 170 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-204ENST00000539827 LINC00052Q96N35 136 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 PATZ1Q9HBE1 687 aaKnown RBP18.28■□□□□ 0.52
HOMER3-204ENST00000539827 C22orf46C9J442 243 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 F12P00748 615 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-204ENST00000539827 GPR6P46095 362 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-204ENST00000539827 GNB2P62879 340 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 OR8G2PQ6IF36 304 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 TMEM182Q6ZP80 229 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-204ENST00000539827 C8orf46Q8TAG6 207 aa18.28■□□□□ 0.52
HOMER3-204ENST00000539827 A0A1W2PPH5 198 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 DFFBO76075 338 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 HRASP01112 189 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 ARHGDIBP52566 201 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 Q6ZRG5 221 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 ZNF525Q8N782 197 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 MARC2Q969Z3 335 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 TMEM186Q96B77 213 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 HRH4Q9H3N8 390 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 ONECUT1Q9UBC0 465 aa18.27■□□□□ 0.52
HOMER3-204ENST00000539827 STRAPQ9Y3F4 350 aaKnown RBP18.27■□□□□ 0.52
HOMER3-204ENST00000539827 CFAP46Q8IYW2 2715 aa18.27■□□□□ 0.51
HOMER3-204ENST00000539827 SRRM4A7MD48 611 aaKnown RBP18.26■□□□□ 0.51
HOMER3-204ENST00000539827 H0YJW9 148 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 H7C2Y5 167 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 APOA2P02652 100 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 RUNX1Q01196 453 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 AARDQ4LEZ3 155 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 OR2G3Q8NGZ4 309 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 ST6GALNAC6Q969X2 333 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 CIB3Q96Q77 187 aaPredicted RBP18.26■□□□□ 0.51
HOMER3-204ENST00000539827 NABP2Q9BQ15 211 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 C1QL1O75973 258 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 IFNA5P01569 189 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 SPCS3P61009 180 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 BLOC1S1P78537 153 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 SLC25A24Q6NUK1 477 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 LILRB2Q8N423 598 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 LY6G5BQ8NDX9 201 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 CACFD1Q9UGQ2 172 aa18.26■□□□□ 0.51
HOMER3-204ENST00000539827 IGHV2-26A0A0B4J1V2 119 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 COX7A1P24310 79 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 EFNA4P52798 201 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 HBG1P69891 147 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 HBG2P69892 147 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 SLC38A11Q08AI6 406 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 DHRS7BQ6IAN0 325 aaPredicted RBP18.25■□□□□ 0.51
HOMER3-204ENST00000539827 ZNF843Q8N446 348 aa18.25■□□□□ 0.51
HOMER3-204ENST00000539827 TET2Q6N021 2002 aaPredicted RBP18.25■□□□□ 0.51
HOMER3-204ENST00000539827 C15orf61A6NNL5 157 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 LIPFP07098 398 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 MYOD1P15172 320 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 POU2AF1Q16633 256 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 FAM71F2Q6NXP2 309 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 UQCC3Q6UW78 93 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 STPG2Q8N412 459 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 OR5AN1Q8NGI8 311 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 OR52E5Q8NH55 327 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 TSNAXQ99598 290 aaKnown RBP18.24■□□□□ 0.51
HOMER3-204ENST00000539827 SSBP3Q9BWW4 388 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-204ENST00000539827 NUDT19A8MXV4 375 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 FHITP49789 147 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 TGIF2LXQ8IUE1 241 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 PARP11Q9NR21 331 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 TCF19Q9Y242 345 aa18.24■□□□□ 0.51
HOMER3-204ENST00000539827 PRH1P02810 166 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 IL3RAP26951 378 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 CAMLGP49069 296 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 ZNF137PP52743 207 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 BTNL8Q6UX41 500 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 THNSL2Q86YJ6 484 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 MMP26Q9NRE1 261 aa18.23■□□□□ 0.51
HOMER3-204ENST00000539827 LOC105371242A0A075B767 164 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 PMS2P5A8MQ11 134 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 SCO1O75880 301 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 PRRX1P54821 245 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 ARF6P62330 175 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 ZNF429Q86V71 674 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 SCGB1C1Q8TD33 95 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 CLEC7AQ9BXN2 247 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 RAB19A4D1S5 217 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 UPK2O00526 184 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 VDAC2P45880 294 aaPredicted RBP18.22■□□□□ 0.51
HOMER3-204ENST00000539827 HLA-DRB5Q30154 266 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 DCHS2Q6V1P9 2916 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 GNPNAT1Q96EK6 184 aaPredicted RBP18.22■□□□□ 0.51
HOMER3-204ENST00000539827 HARBI1Q96MB7 349 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 CLCC1Q96S66 551 aa18.22■□□□□ 0.51
HOMER3-204ENST00000539827 HEYLQ9NQ87 328 aaPredicted RBP18.22■□□□□ 0.51
HOMER3-204ENST00000539827 FOXA2Q9Y261 457 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms