RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SPNP16150 400 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 AADACP22760 399 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
DDB1-215ENST00000539712 KLF5Q13887 457 aaPredicted RBP12.85□□□□□ -0.35
DDB1-215ENST00000539712 CDK10Q15131 360 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 TNXAQ16473 311 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 OR2B11Q5JQS5 317 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 IL34Q6ZMJ4 242 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 KCTD9Q7L273 389 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
DDB1-215ENST00000539712 SNAPC3Q92966 411 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 RYR3Q15413 4870 aa12.85□□□□□ -0.35
DDB1-215ENST00000539712 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 C13orf42A0A1B0GVH6 325 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 ANKRD34BA5PLL1 514 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 TMEM127O75204 238 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 NHLRC4P0CG21 123 aaPredicted RBP12.84□□□□□ -0.35
DDB1-215ENST00000539712 ZNF45Q02386 682 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 C10orf55Q5SWW7 151 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 MFSD4AQ8N468 514 aa12.84□□□□□ -0.35
DDB1-215ENST00000539712 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
DDB1-215ENST00000539712 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
DDB1-215ENST00000539712 A0A1B0GW64 132 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 E7EUB6 86 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 FCER2P06734 321 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 OR9G9P0C7N8 305 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 FCGR2CP31995 323 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 ACOT12Q8WYK0 555 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 CCL28Q9NRJ3 127 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 COA4Q9NYJ1 87 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 TAS2R8Q9NYW2 309 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 ADAM30Q9UKF2 790 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 PRELID3BQ9Y3B1 194 aa12.83□□□□□ -0.36
DDB1-215ENST00000539712 TRBV9A0A0B4J1U6 114 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 TRIM64CA6NLI5 447 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 XRCC3O43542 346 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 AIREO43918 545 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 LY86O95711 162 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 PRH1P02810 166 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 MSMO1Q15800 293 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 HAPLN4Q86UW8 402 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 MMD2Q8IY49 270 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
DDB1-215ENST00000539712 OR13F1Q8NGS4 319 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 ASCL2Q99929 193 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 DCUN1D5Q9BTE7 237 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 DIABLOQ9NR28 239 aa12.82□□□□□ -0.36
DDB1-215ENST00000539712 A0A087WXM4 84 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 PPYP01298 95 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 IGLV1-51P01701 117 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 IL6RP08887 468 aaPredicted RBP12.81□□□□□ -0.36
DDB1-215ENST00000539712 GP9P14770 177 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 ZP3P21754 424 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 ARPC4P59998 168 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 LSM3P62310 102 aaKnown RBP12.81□□□□□ -0.36
DDB1-215ENST00000539712 TIMM50Q3ZCQ8 353 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 OR4S2Q8NH73 311 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 TMEM167AQ8TBQ9 72 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 TCTEX1D2Q8WW35 142 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 PHB2Q99623 299 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 PEF1Q9UBV8 284 aaKnown RBP12.81□□□□□ -0.36
DDB1-215ENST00000539712 ANAPC10Q9UM13 185 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 MRPS7Q9Y2R9 242 aaKnown RBP12.81□□□□□ -0.36
DDB1-215ENST00000539712 SMAD5-AS1Q9Y6J3 95 aa12.81□□□□□ -0.36
DDB1-215ENST00000539712 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 TNFSF12O43508 249 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 KBTBD11O94819 623 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 OR2A4O95047 310 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 RHOGP84095 191 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 Q8N1Y9 231 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 OR5AP2Q8NGF4 316 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 WWC2-AS2Q96NR7 200 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 OR2A7Q96R45 310 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 SPIN2AQ99865 258 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 SPIN2BQ9BPZ2 258 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 U3KQK5 164 aa12.8□□□□□ -0.36
DDB1-215ENST00000539712 HMX3A6NHT5 357 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 SYNJ2BPP57105 145 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 C19orf35Q6ZS72 473 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
DDB1-215ENST00000539712 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
DDB1-215ENST00000539712 CGB1A6NKQ9 187 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms