RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 PJVKQ0ZLH3 352 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 BEAN1Q3B7T3 259 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 C4orf46Q504U0 113 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 TCTEX1D4Q5JR98 221 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 FAM74A1Q5RGS3 127 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 OR2W3Q7Z3T1 314 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 C6orf201Q7Z4U5 140 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 MRPL52Q86TS9 123 aaKnown RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 GAPTQ8N292 157 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 DRAM1Q8N682 238 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 KLHDC1Q8N7A1 406 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 OR10V1Q8NGI7 309 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 MRAPQ8TCY5 172 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 WIPF2Q8TF74 440 aaPredicted RBP5.77□□□□□ -1.49
LMO3-220ENST00000539232 FAAP24Q9BTP7 215 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 GAL3ST2Q9H3Q3 398 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 UQCC1Q9NVA1 299 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 COMMD9Q9P000 198 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 DPM3Q9P2X0 92 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 CKLFQ9UBR5 152 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 GHRLQ9UBU3 117 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 TNFSF18Q9UNG2 199 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 KCNIP3Q9Y2W7 256 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 TMED3Q9Y3Q3 217 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 RYR2Q92736 4967 aa5.77□□□□□ -1.49
LMO3-220ENST00000539232 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 ELOA3CA0A087WX78 387 aaPredicted RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 TMEM30CPA0ZSE6 113 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 FOXI3A8MTJ6 420 aaPredicted RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 TMEM14DPA8MWL7 114 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 F2RL2O00254 374 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 SOCS1O15524 211 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 TGOLN2O43493 480 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 SPDEFO95238 335 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 HOXB5P09067 269 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 HIST1H1BP16401 226 aaKnown RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 HOXA5P20719 270 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 CHATP28329 748 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 S100A2P29034 98 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 KIR2DS4P43632 304 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 DYNLT3P51808 116 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 FABP9Q0Z7S8 132 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 CT45A1Q5HYN5 189 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 KPRPQ5T749 579 aaPredicted RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 MINOS1Q5TGZ0 78 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 TMEM88Q6PEY1 159 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 CBLN2Q8IUK8 224 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 Q8N2B8 174 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 ZNF439Q8NDP4 499 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 CT45A3Q8NHU0 189 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 FAM110DQ8TAY7 271 aaPredicted RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 MRPL30Q8TCC3 161 aaKnown RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 NEK7Q8TDX7 302 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 CFHR4Q92496 578 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 THRSPQ92748 146 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 S100A16Q96FQ6 103 aaKnown RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 RITA1Q96K30 269 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 SLC25A21Q9BQT8 299 aaPredicted RBP5.76□□□□□ -1.49
LMO3-220ENST00000539232 GGACTQ9BVM4 153 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 LPAR5Q9H1C0 372 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 NCOR1P1Q9H4R4 102 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 OR6C3Q9NZP0 311 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 MINOS1-NBL1R4GNA1 71 aa5.76□□□□□ -1.49
LMO3-220ENST00000539232 A0A1B0GUS0 222 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A18PA6NE21 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A16PA6NEW6 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A20PA6NIJ5 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A9PA6NNJ1 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A12PA8MX19 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A5PA8MXJ8 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 LDLRAD4O15165 306 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 PDCD6O75340 191 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 HBZP02008 142 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 SNRNP70P08621 437 aaKnown RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A15PP0C7V4 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A13PP0C7W8 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A14PP0C7W9 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FAM90A24PP0C7X0 464 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 ADCYAP1P18509 176 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 FUT3P21217 361 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 PPP1CCP36873 323 aaKnown RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 CDX1P47902 265 aaPredicted RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 CAV2P51636 162 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 TMEM50BP56557 158 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 H2BFSP57053 126 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 RPL15P61313 204 aaKnown RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 MPV17LQ2QL34 196 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 MOGAT2Q3SYC2 334 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 PLAC9Q5JTB6 97 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 C11orf87Q6NUJ2 197 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 PRR18Q8N4B5 295 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 INO80EQ8NBZ0 244 aaPredicted RBP5.75□□□□□ -1.49
LMO3-220ENST00000539232 OR51D1Q8NGF3 324 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 OR4C13Q8NGP0 309 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 OR1S2Q8NGQ3 325 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 OR9G1Q8NH87 305 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 ST6GALNAC6Q969X2 333 aa5.75□□□□□ -1.49
LMO3-220ENST00000539232 HIST1H2BAQ96A08 127 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms