RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 SRCAPQ6ZRS2 3230 aa1.78□□□□□ -2.13
SRGAP1-203ENST00000537585 TMEM131Q92545 1883 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 COL5A1P20908 1838 aaPredicted RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 ROCK1Q13464 1354 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 EIF3AQ14152 1382 aaKnown RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 CARMIL3Q8ND23 1372 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 TRBV20OR9-2A0A075B6H5 130 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 IGHV3-21A0A0B4J1V1 117 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 IGHV1-69-2A0A0G2JMI3 117 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 A0A0J9YY10 115 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 A0A1B0GX78 115 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 VPS37CA5D8V6 355 aaPredicted RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 TRAPPC13A5PLN9 417 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 C1orf196B1AJZ1 125 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 MFSD11O43934 449 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 CCNE2O96020 404 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 SERPINE1P05121 402 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 CRYGDP07320 174 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 PHBP35232 272 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 PSMD8P48556 350 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 EMP1P54849 157 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 C1QTNF8P60827 252 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 RAB4BP61018 213 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 HBA1P69905 142 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 BAMBIQ13145 260 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 SMCO1Q147U7 214 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 LGALSLQ3ZCW2 172 aaPredicted RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 PRSS54Q6PEW0 395 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 DCUN1D2Q6PH85 259 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 WDR59Q6PJI9 974 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 ZNF767PQ75MW2 155 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 HMGN2P46Q86SG4 172 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 LRP11Q86VZ4 500 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 GDPD1Q8N9F7 314 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 ZFP62Q8NB50 900 aaPredicted RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 ZNF439Q8NDP4 499 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 MBD3L1Q8WWY6 194 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 DNAJC9Q8WXX5 260 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 ROPN1LQ96C74 230 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 MS4A6EQ96DS6 147 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 CCL13Q99616 98 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 MGLLQ99685 303 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 PRTFDC1Q9NRG1 225 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 SLC23A2Q9UGH3 650 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 PYCARDQ9ULZ3 195 aa1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 MRPS16Q9Y3D3 137 aaKnown RBP1.77□□□□□ -2.13
SRGAP1-203ENST00000537585 SCN2AQ99250 2005 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 FHAD1B1AJZ9 1412 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 IGSF9BQ9UPX0 1349 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 C7orf66A4D0T2 115 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 MAP1LC3B2A6NCE7 125 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 GGT3PA6NGU5 568 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 A8MUN3 132 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 A8MWP4 228 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 LST1O00453 97 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 BET1O15155 118 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 ARPC5O15511 151 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 SLC25A20O43772 301 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 PIAS1O75925 651 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 NDUFC2O95298 119 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 APOMO95445 188 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 LINC00869P0C866 280 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 NTF3P20783 257 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 CRABP1P29762 137 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 TAS2R45P59539 299 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 TFAMQ00059 246 aaKnown RBP1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 UBE2SQ16763 222 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 PYCR3Q53H96 274 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 SAMD13Q5VXD3 122 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 GLT8D1Q68CQ7 371 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 TBPL2Q6SJ96 375 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 AMTNQ6UX39 209 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 CYHR1Q6ZMK1 362 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 SCXQ7RTU7 201 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 CROCCP2Q86T23 111 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 BPIFA4PQ86YQ2 179 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 SLC22A24Q8N4F4 322 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 TMEM105Q8N8V8 129 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 C12orf29Q8N999 325 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 OR13C8Q8NGS7 320 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 OR52N1Q8NH53 320 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 CMBLQ96DG6 245 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 C1orf50Q9BV19 199 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 MAP1LC3BQ9GZQ8 125 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 WDR61Q9GZS3 305 aaKnown RBP1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 TMEM222Q9H0R3 208 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 BOLA2Q9H3K6 86 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 LINC00574Q9H8X3 128 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 FAM60AQ9NP50 221 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 LHX9Q9NQ69 397 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 GSKIPQ9P0R6 139 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 MCTS1Q9ULC4 181 aaKnown RBP1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 SNX12Q9UMY4 172 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 U3KQK5 164 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 UNC79Q9P2D8 2635 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 PIKFYVEQ9Y2I7 2098 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 C2orf16Q68DN1 1984 aa1.76□□□□□ -2.13
SRGAP1-203ENST00000537585 PBRM1Q86U86 1689 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms