RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PSMB3P49720 205 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 EDDM3BP56851 147 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 CD81P60033 236 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 MORN2Q502X0 79 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 WDR25Q64LD2 544 aaPredicted RBP10.93□□□□□ -0.66
LDLR-203ENST00000535915 GCSAMQ8N6F7 178 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 ZNRF1Q8ND25 227 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 PPP1R35Q8TAP8 253 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 OR2V2Q96R30 315 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 SMIM7Q9BQ49 75 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 PPP1R2P9O14990 202 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 PROP1O75360 226 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 PMS2P11Q13670 270 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 SPRNQ5BIV9 151 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 MOGAT3Q86VF5 341 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 C1orf87Q8N0U7 546 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 SNX22Q96L94 193 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
LDLR-203ENST00000535915 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 JPT1Q9UK76 154 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 MGAQ8IWI9 3026 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 M0R1X1 148 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 CRYAAP02489 173 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 PRAMEF5Q5TYX0 476 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 RP1L1Q8IWN7 2480 aaPredicted RBP10.92□□□□□ -0.66
LDLR-203ENST00000535915 C17orf112F2Z3M2 114 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 CEACAM4O75871 244 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 HPRT1P00492 218 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 TRGC2P03986 189 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 GNB2P62879 340 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 ADIRFQ15847 76 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 FAM90A1Q86YD7 464 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 RPUSD4Q96CM3 377 aaKnown RBP10.92□□□□□ -0.66
LDLR-203ENST00000535915 FAM210BQ96KR6 192 aa10.92□□□□□ -0.66
LDLR-203ENST00000535915 RAI1Q7Z5J4 1906 aaPredicted RBP10.91□□□□□ -0.66
LDLR-203ENST00000535915 C15orf62A8K5M9 175 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 SPRY3O43610 288 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 YPEL1O60688 119 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 KLF3P57682 345 aaPredicted RBP10.91□□□□□ -0.66
LDLR-203ENST00000535915 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 OR4A16Q8NH70 328 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 RAB24Q969Q5 203 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 OR6C3Q9NZP0 311 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 TP53TG5Q9Y2B4 290 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 YLPM1P49750 1951 aaKnown RBP10.91□□□□□ -0.66
LDLR-203ENST00000535915 DEFA4P12838 97 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 RND2P52198 227 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 TMEM241Q24JQ0 296 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 ZNF474Q6S9Z5 364 aaPredicted RBP10.91□□□□□ -0.66
LDLR-203ENST00000535915 SPNS3Q6ZMD2 512 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 VKORC1L1Q8N0U8 176 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 RPRMLQ8N4K4 120 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
LDLR-203ENST00000535915 PLCE1Q9P212 2302 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 FABP4P15090 132 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 CFHR2P36980 270 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 ZNF134P52741 427 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 NKX6-1P78426 367 aaPredicted RBP10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 KBTBD11O94819 623 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 CD1BP29016 333 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 GLRXP35754 106 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 LOXL3P58215 753 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 ERVK-16P61578 105 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 OR13D1Q8NGV5 346 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 ITLN1Q8WWA0 313 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
LDLR-203ENST00000535915 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 MDKP21741 143 aaPredicted RBP10.89□□□□□ -0.67
LDLR-203ENST00000535915 G0S2P27469 103 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 CR1LQ2VPA4 569 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 FAM201AQ5SY85 155 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 Q8TCH9 128 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 S1PR3Q99500 378 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
LDLR-203ENST00000535915 CALYQ9NYX4 217 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 FAM215AQ9Y5M1 114 aa10.89□□□□□ -0.67
LDLR-203ENST00000535915 ZNF318Q5VUA4 2279 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms