RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 BSPH1Q075Z2 132 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-202ENST00000535906 GAFA1Q96PS6 74 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 CCL13Q99616 98 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 TCEAL7Q9BRU2 100 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 FAM234AQ9H0X4 552 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 TANC2Q9HCD6 1990 aa11.06□□□□□ -0.64
VPS33B-202ENST00000535906 M0R1X1 148 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-202ENST00000535906 GYPAP02724 150 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
VPS33B-202ENST00000535906 NQO2P16083 231 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 TNFSF4P23510 183 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 PNRC1Q12796 327 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-202ENST00000535906 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 Q8TCH9 128 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 DTD1Q8TEA8 209 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 Q8WTZ3 238 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 CA5BP1Q8WTZ4 195 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 OR4A8P0C604 315 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 FAM87AP0C7U9 286 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 ELLP55199 621 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-202ENST00000535906 ATP6V1FQ16864 119 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 ZNF343Q6P1L6 599 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 TCF23Q7RTU1 214 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 FAM216BQ8N7L0 139 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 NCOR1P1Q9H4R4 102 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
VPS33B-202ENST00000535906 KBTBD11-OT1A0A1B0GTJ5 212 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 CXCL1P09341 107 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 ERVFRD-1P60508 538 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 HPRT1P00492 218 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 IFNA1P01562 189 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
VPS33B-202ENST00000535906 HNF4GQ14541 408 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 CT45A1Q5HYN5 189 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 ZNF788Q6ZQV5 615 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 SSX9Q7RTT3 188 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
VPS33B-202ENST00000535906 CT45A3Q8NHU0 189 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 QTRT1Q9BXR0 403 aaKnown RBP11.04□□□□□ -0.64
VPS33B-202ENST00000535906 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
VPS33B-202ENST00000535906 IGKV1D-33P01593 117 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 IGKV1-33P01594 117 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-202ENST00000535906 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 GFOD1Q9NXC2 390 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 URGCP-MRPS24S4R325 110 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 RELNP78509 3460 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 TRGV10A0A0A0MS01 117 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 CEBPZOSA8MTT3 80 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 CTAG1AP78358 180 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 KIAA0141Q14154 515 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-202ENST00000535906 TEX36Q5VZQ5 186 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 SLC16A13Q7RTY0 426 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 NANPQ8TBE9 248 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 LHX4Q969G2 390 aa11.03□□□□□ -0.64
VPS33B-202ENST00000535906 YLPM1P49750 1951 aaKnown RBP11.02□□□□□ -0.64
VPS33B-202ENST00000535906 IRF2P14316 349 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 PLA2G5P39877 138 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 ACSM6Q6P461 480 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 OR10P1Q8NGE3 313 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 PKDREJQ9NTG1 2253 aa11.02□□□□□ -0.65
VPS33B-202ENST00000535906 SAA2-SAA4A0A096LPE2 208 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 MMP23AO75900 390 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 MBP02144 154 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 SAA2P0DJI9 122 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF674Q2M3X9 581 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 DDB2Q92466 427 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 S1PR3Q99500 378 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF251Q9BRH9 671 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 TMPRSS2O15393 492 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 RBFOX2O43251 390 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS33B-202ENST00000535906 CLN5O75503 358 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 TNFRSF1AP19438 455 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 RAB7AP51149 207 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 RND2P52198 227 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 VWC2Q2TAL6 325 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 PRAMEF5Q5TYX0 476 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 POLEQ07864 2286 aa11.01□□□□□ -0.65
VPS33B-202ENST00000535906 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 CTXND1A0A1B0GTU2 59 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 FGF7P21781 194 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 B2MP61769 119 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 AARDQ4LEZ3 155 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms