RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MAST4O15021 2626 aa2.54□□□□□ -2
USP48-215ENST00000534705 A0A087WWC5 75 aa2.54□□□□□ -2
USP48-215ENST00000534705 TRAV1-2A0A0B4J238 106 aa2.54□□□□□ -2
USP48-215ENST00000534705 ANKRD20A5PA0PJZ0 165 aa2.54□□□□□ -2
USP48-215ENST00000534705 IRGMA1A4Y4 181 aa2.54□□□□□ -2
USP48-215ENST00000534705 C7orf77A4D0Y5 90 aa2.54□□□□□ -2
USP48-215ENST00000534705 C9JQL5 133 aa2.54□□□□□ -2
USP48-215ENST00000534705 C11orf98E9PRG8 122 aa2.54□□□□□ -2
USP48-215ENST00000534705 F5H5P2 479 aa2.54□□□□□ -2
USP48-215ENST00000534705 RNASEK-C17orf49H0YIS7 233 aa2.54□□□□□ -2
USP48-215ENST00000534705 SAP18O00422 153 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 GABRPO00591 440 aa2.54□□□□□ -2
USP48-215ENST00000534705 RAB29O14966 203 aa2.54□□□□□ -2
USP48-215ENST00000534705 MAGEB4O15481 346 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 TGOLN2O43493 480 aa2.54□□□□□ -2
USP48-215ENST00000534705 SSNA1O43805 119 aa2.54□□□□□ -2
USP48-215ENST00000534705 CHST1O43916 411 aa2.54□□□□□ -2
USP48-215ENST00000534705 EFNA2O43921 213 aa2.54□□□□□ -2
USP48-215ENST00000534705 CREBL2O60519 120 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BKO60814 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 ENTPD6O75354 484 aa2.54□□□□□ -2
USP48-215ENST00000534705 CA11O75493 328 aa2.54□□□□□ -2
USP48-215ENST00000534705 YIF1AO95070 293 aa2.54□□□□□ -2
USP48-215ENST00000534705 VENTXO95231 258 aa2.54□□□□□ -2
USP48-215ENST00000534705 AIFM1O95831 613 aa2.54□□□□□ -2
USP48-215ENST00000534705 NUDT14O95848 222 aa2.54□□□□□ -2
USP48-215ENST00000534705 PDYNP01213 254 aa2.54□□□□□ -2
USP48-215ENST00000534705 GCGP01275 180 aa2.54□□□□□ -2
USP48-215ENST00000534705 GAPDHP04406 335 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 IGKV3-11P04433 115 aa2.54□□□□□ -2
USP48-215ENST00000534705 P04436 131 aa2.54□□□□□ -2
USP48-215ENST00000534705 HLA-DPB1P04440 258 aa2.54□□□□□ -2
USP48-215ENST00000534705 CD2P06729 351 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BJP06899 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 SOD3P08294 240 aa2.54□□□□□ -2
USP48-215ENST00000534705 SNRPCP09234 159 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 CT62P0C5K7 136 aa2.54□□□□□ -2
USP48-215ENST00000534705 OR5AC1P0C628 307 aa2.54□□□□□ -2
USP48-215ENST00000534705 LINC00032P0C843 101 aa2.54□□□□□ -2
USP48-215ENST00000534705 RD3LP0DJH9 198 aa2.54□□□□□ -2
USP48-215ENST00000534705 ZNF43P17038 809 aa2.54□□□□□ -2
USP48-215ENST00000534705 TBPP20226 339 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H1TP22492 207 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BOP23527 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 S100A2P29034 98 aa2.54□□□□□ -2
USP48-215ENST00000534705 BRS3P32247 399 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BBP33778 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 SAA4P35542 130 aa2.54□□□□□ -2
USP48-215ENST00000534705 IFNGR2P38484 337 aa2.54□□□□□ -2
USP48-215ENST00000534705 TMEM33P57088 247 aa2.54□□□□□ -2
USP48-215ENST00000534705 MLF1P58340 268 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BDP58876 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BCP62807 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 MRPS10P82664 201 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 PITPNAQ00169 270 aa2.54□□□□□ -2
USP48-215ENST00000534705 OC90Q02509 493 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 C1DQ13901 141 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 GNMTQ14749 295 aa2.54□□□□□ -2
USP48-215ENST00000534705 RHEBQ15382 184 aa2.54□□□□□ -2
USP48-215ENST00000534705 RSU1Q15404 277 aa2.54□□□□□ -2
USP48-215ENST00000534705 NSDHLQ15738 373 aa2.54□□□□□ -2
USP48-215ENST00000534705 MRPL23Q16540 153 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 PSG3Q16557 428 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST2H2BEQ16778 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 C17orf58Q2M2W7 97 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 NCMAPQ5T1S8 102 aa2.54□□□□□ -2
USP48-215ENST00000534705 C1orf194Q5T5A4 169 aa2.54□□□□□ -2
USP48-215ENST00000534705 REEP3Q6NUK4 255 aa2.54□□□□□ -2
USP48-215ENST00000534705 TRIM40Q6P9F5 258 aa2.54□□□□□ -2
USP48-215ENST00000534705 ZNF620Q6ZNG0 422 aa2.54□□□□□ -2
USP48-215ENST00000534705 C16orf47Q6ZP98 133 aaPredicted RBP2.54□□□□□ -2
USP48-215ENST00000534705 ACOT7LQ6ZUV0 252 aa2.54□□□□□ -2
USP48-215ENST00000534705 WDFY1Q8IWB7 410 aa2.54□□□□□ -2
USP48-215ENST00000534705 BPIFB2Q8N4F0 458 aa2.54□□□□□ -2
USP48-215ENST00000534705 TOMM5Q8N4H5 51 aa2.54□□□□□ -2
USP48-215ENST00000534705 ZADH2Q8N4Q0 377 aa2.54□□□□□ -2
USP48-215ENST00000534705 OR10G2Q8NGC3 310 aa2.54□□□□□ -2
USP48-215ENST00000534705 OR10D4PQ8NGN7 298 aa2.54□□□□□ -2
USP48-215ENST00000534705 OR1J4Q8NGS1 313 aa2.54□□□□□ -2
USP48-215ENST00000534705 ORAOV1Q8WV07 137 aa2.54□□□□□ -2
USP48-215ENST00000534705 GHSRQ92847 366 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BHQ93079 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 MUCL1Q96DR8 90 aa2.54□□□□□ -2
USP48-215ENST00000534705 PIK3IP1Q96FE7 263 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BNQ99877 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 HIST1H2BMQ99879 126 aa2.54□□□□□ -2
USP48-215ENST00000534705 NIPSNAP1Q9BPW8 284 aa2.54□□□□□ -2
USP48-215ENST00000534705 C20orf144Q9BQM9 153 aa2.54□□□□□ -2
USP48-215ENST00000534705 DOHHQ9BU89 302 aa2.54□□□□□ -2
USP48-215ENST00000534705 TPT1P8Q9HAU6 139 aa2.54□□□□□ -2
USP48-215ENST00000534705 PROK2Q9HC23 129 aa2.54□□□□□ -2
USP48-215ENST00000534705 SH2D2AQ9NP31 389 aa2.54□□□□□ -2
USP48-215ENST00000534705 EXOSC4Q9NPD3 245 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 PRTFDC1Q9NRG1 225 aa2.54□□□□□ -2
USP48-215ENST00000534705 INPP5EQ9NRR6 644 aa2.54□□□□□ -2
USP48-215ENST00000534705 SIGLEC8Q9NYZ4 499 aa2.54□□□□□ -2
USP48-215ENST00000534705 ABRACLQ9P1F3 81 aa2.54□□□□□ -2
USP48-215ENST00000534705 COMMD3Q9UBI1 195 aa2.54□□□□□ -2
USP48-215ENST00000534705 CES1P1Q9UKY3 287 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms