RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 NECAP1Q8NC96 275 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 ADAD2Q8NCV1 583 aaKnown RBP8.01□□□□□ -1.13
CSDE1-217ENST00000534699 C15orf40Q8WUR7 153 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 AUNIPQ9H7T9 357 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 VWFP04275 2813 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 IGHV4OR15-8A0A075B7B6 117 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 A0A087WW49 117 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 A0A0B4J203 849 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 LGALS9O00182 355 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 SULT1C2O00338 296 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 IGLV1-51P01701 117 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 PRB2P02812 416 aaPredicted RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 CRYGCP07315 174 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 ZNF735P0CB33 412 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 TAS2R46P59540 309 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 PLA2G7Q13093 441 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 LPCAT3Q6P1A2 487 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 Q8N402 240 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 DLX4Q92988 240 aaPredicted RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 OR2A7Q96R45 310 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 PHB2Q99623 299 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 SCPEP1Q9HB40 452 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 RABL2AQ9UBK7 228 aaPredicted RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 RABL2BQ9UNT1 228 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 U3KQK5 164 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 C3orf84H3BNL1 204 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 GP9P14770 177 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 PSMB6P28072 239 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 MECP2P51608 486 aaKnown RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 SSBP2P81877 361 aaPredicted RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 MRGPRG-AS1Q2M3A8 158 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 DEFB136Q30KP8 78 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 SGPP2Q8IWX5 399 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 BEST4Q8NFU0 473 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 SRSF12Q8WXF0 261 aaKnown RBP8□□□□□ -1.13
CSDE1-217ENST00000534699 YIPF6Q96EC8 236 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 ST6GALNAC5Q9BVH7 336 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 ADAM30Q9UKF2 790 aa8□□□□□ -1.13
CSDE1-217ENST00000534699 SSX5O60225 188 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 CRYZL1O95825 349 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 HPRT1P00492 218 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 ATP5G2Q06055 141 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 DHRS11Q6UWP2 260 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 MFSD4AQ8N468 514 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 OR1L6Q8NGR2 347 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 SLC25A38Q96DW6 304 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 C5orf30Q96GV9 206 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 PLEKHA2Q9HB19 425 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 TECRQ9NZ01 308 aaKnown RBP7.99□□□□□ -1.13
CSDE1-217ENST00000534699 KBTBD11O94819 623 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
CSDE1-217ENST00000534699 S100GP29377 79 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 ANKRD13BQ86YJ7 626 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 DRAXINQ8NBI3 349 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-217ENST00000534699 GRPEL2Q8TAA5 225 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 SLC2A9Q9NRM0 540 aa7.99□□□□□ -1.13
CSDE1-217ENST00000534699 ZNF230Q9UIE0 474 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-217ENST00000534699 TMEM235A6NFC5 223 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 SAP30O75446 220 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 IL6RP08887 468 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 SAA1P0DJI8 122 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 IDNKQ5T6J7 187 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 DUX3Q96PT4 197 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 FYTTD1Q96QD9 318 aaKnown RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 CLCC1Q96S66 551 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 TRAV18A0A075B6X5 111 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 SRRM4A7MD48 611 aaKnown RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 LINC00473A8K010 186 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 RPL27AP46776 148 aaKnown RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 ELLP55199 621 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-217ENST00000534699 DYRK1AQ13627 763 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 TNXAQ16473 311 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 OR9G4Q8NGQ1 327 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 ZNF355PQ9NSJ1 428 aa7.98□□□□□ -1.13
CSDE1-217ENST00000534699 A0A075B6Q4 140 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 IGKV1D-8A0A087WSZ0 117 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 MSGN1A6NI15 193 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 MPPED1O15442 326 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 FCGR3BO75015 233 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 PPYP01298 95 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 IGLV2-14P01704 120 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 TSPAN14Q8NG11 270 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 TCTEX1D2Q8WW35 142 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 CXorf58Q96LI9 332 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 DCUN1D5Q9BTE7 237 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 ZNF430Q9H8G1 570 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-217ENST00000534699 COA4Q9NYJ1 87 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 THYN1Q9P016 225 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 TRBV7-1A0A0A6YYK4 115 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 APOA1P02647 267 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 NQO2P16083 231 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 SLURP1P55000 103 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 UCP3P55916 312 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 OR4A47Q6IF82 309 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 GPHB5Q86YW7 130 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 NUDCD2Q8WVJ2 157 aa7.97□□□□□ -1.13
CSDE1-217ENST00000534699 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms