RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CASTOR1Q8WTX7 329 aa17.18■□□□□ 0.34
BEST1-207ENST00000533521 DLX4Q92988 240 aaPredicted RBP17.18■□□□□ 0.34
BEST1-207ENST00000533521 AIFM2Q9BRQ8 373 aa17.18■□□□□ 0.34
BEST1-207ENST00000533521 ALX4Q9H161 411 aaPredicted RBP17.18■□□□□ 0.34
BEST1-207ENST00000533521 ANAPC10Q9UM13 185 aa17.18■□□□□ 0.34
BEST1-207ENST00000533521 IGHV4OR15-8A0A075B7B6 117 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 A0A087WW49 117 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 MSGN1A6NI15 193 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 RBFOX2O43251 390 aaKnown RBP eCLIP17.17■□□□□ 0.34
BEST1-207ENST00000533521 PPYP01298 95 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 SAA1P0DJI8 122 aaPredicted RBP17.17■□□□□ 0.34
BEST1-207ENST00000533521 ZP3P21754 424 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 ACSM6Q6P461 480 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 OR13F1Q8NGS4 319 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 SRSF12Q8WXF0 261 aaKnown RBP17.17■□□□□ 0.34
BEST1-207ENST00000533521 SNAPC3Q92966 411 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 BORCS5Q969J3 196 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 SPIN2AQ99865 258 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 SPIN2BQ9BPZ2 258 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 DCUN1D5Q9BTE7 237 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 FUNDC2Q9BWH2 189 aa17.17■□□□□ 0.34
BEST1-207ENST00000533521 RANGRFQ9HD47 186 aaPredicted RBP17.17■□□□□ 0.34
BEST1-207ENST00000533521 LSM4Q9Y4Z0 139 aaKnown RBP17.17■□□□□ 0.34
BEST1-207ENST00000533521 C13orf42A0A1B0GVH6 325 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 J3QRK9 145 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 ACTL6BO94805 426 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 NAT1P18440 290 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 MAS1LP35410 378 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 TGFBR1P36897 503 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 TNXAQ16473 311 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 SAMD12Q8N8I0 201 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 ADAD2Q8NCV1 583 aaKnown RBP17.16■□□□□ 0.34
BEST1-207ENST00000533521 TCTEX1D2Q8WW35 142 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 ZNF430Q9H8G1 570 aaPredicted RBP17.16■□□□□ 0.34
BEST1-207ENST00000533521 ZNF355PQ9NSJ1 428 aa17.16■□□□□ 0.34
BEST1-207ENST00000533521 ZNF256Q9Y2P7 627 aaPredicted RBP17.16■□□□□ 0.34
BEST1-207ENST00000533521 OR2A4O95047 310 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 HRASP01112 189 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 IGHV3-11P01762 117 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 OR9G9P0C7N8 305 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 ECI1P42126 302 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 SLURP1P55000 103 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 BRWD1-AS2P59051 145 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 LSM3P62310 102 aaKnown RBP17.15■□□□□ 0.34
BEST1-207ENST00000533521 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 DHRS11Q6UWP2 260 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 PUSL1Q8N0Z8 303 aaKnown RBP17.15■□□□□ 0.34
BEST1-207ENST00000533521 TMEM167AQ8TBQ9 72 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 ACOT12Q8WYK0 555 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 OR2A7Q96R45 310 aa17.15■□□□□ 0.34
BEST1-207ENST00000533521 APOA1P02647 267 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 ZNF343Q6P1L6 599 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 IDO2Q6ZQW0 420 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 SLC25A42Q86VD7 318 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 PHB2Q99623 299 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 IFT46Q9NQC8 304 aa17.14■□□□□ 0.33
BEST1-207ENST00000533521 KBTBD11O94819 623 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 FGF2P09038 288 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 TAS2R20P59543 309 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 FAM209BQ5JX69 171 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 TTC9CQ8N5M4 171 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 SLC5A7Q9GZV3 580 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 CCL28Q9NRJ3 127 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 TAS2R8Q9NYW2 309 aa17.13■□□□□ 0.33
BEST1-207ENST00000533521 TRBV9A0A0B4J1U6 114 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 FAM223BA6NKX1 122 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 PTHLHP12272 177 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 PRSS3P35030 304 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 TAS2R46P59540 309 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 CD69Q07108 199 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 CATR1Q13166 79 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 DYRK1AQ13627 763 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 POU2AF1Q16633 256 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 FAM223AQ8IWN6 122 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 OR4A5Q8NH83 315 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 CD300LFQ8TDQ1 290 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 ELOVL1Q9BW60 279 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 COA4Q9NYJ1 87 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 ADAM30Q9UKF2 790 aa17.12■□□□□ 0.33
BEST1-207ENST00000533521 NHLRC4P0CG21 123 aaPredicted RBP17.11■□□□□ 0.33
BEST1-207ENST00000533521 SMIM18P0DKX4 95 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 NCS1P62166 190 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 KLF5Q13887 457 aaPredicted RBP17.11■□□□□ 0.33
BEST1-207ENST00000533521 OR2B11Q5JQS5 317 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 ANKRD13BQ86YJ7 626 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 OR6Q1Q8NGQ2 317 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 SCPEP1Q9HB40 452 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 BET1LQ9NYM9 111 aa17.11■□□□□ 0.33
BEST1-207ENST00000533521 PEF1Q9UBV8 284 aaKnown RBP17.11■□□□□ 0.33
BEST1-207ENST00000533521 SMIM31A0A1B0GVY4 71 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 MPPED1O15442 326 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 SAP30O75446 220 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 TAS2R31P59538 309 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 KLK9Q2XQG4 91 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 SPAG16Q8N0X2 631 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 CADM3Q8N126 398 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 OR4C12Q96R67 309 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 PRR25Q96S07 402 aa17.1■□□□□ 0.33
BEST1-207ENST00000533521 EHFQ9NZC4 300 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms