RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 LRRC37A5PQ49AS3 106 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 TMEM177Q53S58 311 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
TRIM3-213ENST00000533309 RRNAD1Q96FB5 475 aaKnown RBP12.86□□□□□ -0.35
TRIM3-213ENST00000533309 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
TRIM3-213ENST00000533309 IGHV3OR16-10A0A075B7F0 116 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 A0A1B0GU03 582 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 SRRM4A7MD48 611 aaKnown RBP12.85□□□□□ -0.35
TRIM3-213ENST00000533309 OOSP1A8MZH6 123 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 J3QLI3 93 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 TIMM23O14925 209 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 PITX3O75364 302 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 ATG12O94817 140 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 MC5RP33032 325 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 RAB13P51153 203 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 KLF17Q5JT82 389 aaPredicted RBP12.85□□□□□ -0.35
TRIM3-213ENST00000533309 RUSC1-AS1Q66K80 236 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
TRIM3-213ENST00000533309 RHOVQ96L33 236 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 CACNG5Q9UF02 275 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
TRIM3-213ENST00000533309 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
TRIM3-213ENST00000533309 RAB32Q13637 225 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 SMCO1Q147U7 214 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 NOXA1Q86UR1 476 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
TRIM3-213ENST00000533309 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 H0YIZ8 118 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 MPC2O95563 127 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 MBPP02686 304 aaPredicted RBP12.84□□□□□ -0.35
TRIM3-213ENST00000533309 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 PSMB6P28072 239 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 ERVK-16P61578 105 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
TRIM3-213ENST00000533309 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 H2BFWTQ7Z2G1 175 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 MALSU1Q96EH3 234 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 RITA1Q96K30 269 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 COA4Q9NYJ1 87 aa12.84□□□□□ -0.35
TRIM3-213ENST00000533309 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.35
TRIM3-213ENST00000533309 SHOXO15266 292 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 VENTXO95231 258 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 HRASP01112 189 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 IGLV2-23P01705 113 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
TRIM3-213ENST00000533309 FBLN7Q53RD9 439 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
TRIM3-213ENST00000533309 OR4A47Q6IF82 309 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 MS4A7Q9GZW8 240 aaPredicted RBP12.83□□□□□ -0.36
TRIM3-213ENST00000533309 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
TRIM3-213ENST00000533309 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 SMAD7O15105 426 aaKnown RBP12.82□□□□□ -0.36
TRIM3-213ENST00000533309 SCGB1D2O95969 90 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 SAA1P0DJI8 122 aaPredicted RBP12.82□□□□□ -0.36
TRIM3-213ENST00000533309 CD1BP29016 333 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 EIF2B2P49770 351 aaKnown RBP12.82□□□□□ -0.36
TRIM3-213ENST00000533309 OR1S1Q8NH92 325 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
TRIM3-213ENST00000533309 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
TRIM3-213ENST00000533309 K7EPK0 472 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 NXPH3O95157 252 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 FSHBP01225 129 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 NKX2-1P43699 371 aaPredicted RBP12.81□□□□□ -0.36
TRIM3-213ENST00000533309 S100A10P60903 97 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
TRIM3-213ENST00000533309 RELBQ01201 579 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 ID3Q02535 119 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 KRTAP1-1Q07627 177 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 FGL1Q08830 312 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 AARDQ4LEZ3 155 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
TRIM3-213ENST00000533309 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 GRPEL2Q8TAA5 225 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 MBD2Q9UBB5 411 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 NAV3Q8IVL0 2385 aa12.81□□□□□ -0.36
TRIM3-213ENST00000533309 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
TRIM3-213ENST00000533309 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 SLC25A4P12235 298 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 CD24P25063 80 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 ANK3Q12955 4377 aaKnown RBP12.8□□□□□ -0.36
TRIM3-213ENST00000533309 FOXRED2Q8IWF2 684 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 BET1LQ9NYM9 111 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms