RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SECTM1Q8WVN6 248 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 DCUN1D4Q92564 292 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 TAS2R8Q9NYW2 309 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 IGHV4OR15-8A0A075B7B6 117 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 A0A087WW49 117 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 PPYP01298 95 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 CDK10Q15131 360 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 MSMO1Q15800 293 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 PHB2Q99623 299 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 IFT46Q9NQC8 304 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 CCL28Q9NRJ3 127 aa23.4■■□□□ 1.34
SSSCA1-207ENST00000533115 MSGN1A6NI15 193 aa23.39■■□□□ 1.33
SSSCA1-207ENST00000533115 SLURP1P55000 103 aa23.39■■□□□ 1.33
SSSCA1-207ENST00000533115 OR4S2Q8NH73 311 aa23.39■■□□□ 1.33
SSSCA1-207ENST00000533115 ZNF430Q9H8G1 570 aaPredicted RBP23.39■■□□□ 1.33
SSSCA1-207ENST00000533115 OVOL1O14753 267 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 CREBL2O60519 120 aaPredicted RBP23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 HSPB1P04792 205 aaKnown RBP23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 SMIM18P0DKX4 95 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 INSL3P51460 131 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 GIMAP1Q8WWP7 306 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 SRSF12Q8WXF0 261 aaKnown RBP23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 ACOT12Q8WYK0 555 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 DLX4Q92988 240 aaPredicted RBP23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 TNCP24821 2201 aa23.38■■□□□ 1.33
SSSCA1-207ENST00000533115 BRI3O95415 125 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 BRWD1-AS2P59051 145 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 ZBTB34Q8NCN2 500 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 GPHA2Q96T91 129 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 COMMD3Q9UBI1 195 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 ANAPC10Q9UM13 185 aa23.37■■□□□ 1.33
SSSCA1-207ENST00000533115 A0A0G2JLM5 398 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 C13orf42A0A1B0GVH6 325 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 TNFSF12O43508 249 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 EIF4EP06730 217 aaKnown RBP23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 APELAP0DMC3 54 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 MMD2Q8IY49 270 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 VKORC1L1Q8N0U8 176 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 TINAGL1Q9GZM7 467 aaPredicted RBP23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 SLC5A7Q9GZV3 580 aa23.36■■□□□ 1.33
SSSCA1-207ENST00000533115 ACTL6BO94805 426 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 ECI1P42126 302 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 KIR2DS2P43631 304 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 FXYD4P59646 89 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 CMTM3Q96MX0 182 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 COA4Q9NYJ1 87 aa23.35■■□□□ 1.33
SSSCA1-207ENST00000533115 PRSS3P35030 304 aa23.34■■□□□ 1.33
SSSCA1-207ENST00000533115 ZNF429Q86V71 674 aa23.34■■□□□ 1.33
SSSCA1-207ENST00000533115 VSTM2AQ8TAG5 236 aa23.34■■□□□ 1.33
SSSCA1-207ENST00000533115 EHFQ9NZC4 300 aa23.34■■□□□ 1.33
SSSCA1-207ENST00000533115 MPPED1O15442 326 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 OR2A4O95047 310 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 APOA1P02647 267 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 NAT1P18440 290 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 DCTN2Q13561 401 aaKnown RBP23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 ANKRD13BQ86YJ7 626 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 ADAD2Q8NCV1 583 aaKnown RBP23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 OR2A7Q96R45 310 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 SPIN2AQ99865 258 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 SPIN2BQ9BPZ2 258 aa23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 NAA50Q9GZZ1 169 aaKnown RBP23.33■■□□□ 1.33
SSSCA1-207ENST00000533115 OR9G9P0C7N8 305 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 RFX2P48378 723 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 RORCP51449 518 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 DHRS11Q6UWP2 260 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 TMEM17Q86X19 198 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 PUSL1Q8N0Z8 303 aaKnown RBP23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 PRR25Q96S07 402 aa23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 RANGRFQ9HD47 186 aaPredicted RBP23.32■■□□□ 1.32
SSSCA1-207ENST00000533115 SMIM31A0A1B0GVY4 71 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 SAP30O75446 220 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 KBTBD11O94819 623 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 GABARAPO95166 117 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 HRASP01112 189 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 HERV-K104P61576 105 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 DYRK1AQ13627 763 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 CTF1Q16619 201 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 C10orf55Q5SWW7 151 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 ZNF818PQ6ZRF7 136 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 TMEM167AQ8TBQ9 72 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 USMG5Q96IX5 58 aa23.31■■□□□ 1.32
SSSCA1-207ENST00000533115 PMP2P02689 132 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 TAS2R46P59540 309 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 DEFA5Q01523 94 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 CATR1Q13166 79 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 SPAG16Q8N0X2 631 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 OR5H2Q8NGV7 314 aa23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 ZNF256Q9Y2P7 627 aaPredicted RBP23.3■■□□□ 1.32
SSSCA1-207ENST00000533115 SULT1C2O00338 296 aa23.29■■□□□ 1.32
SSSCA1-207ENST00000533115 ACSM6Q6P461 480 aa23.29■■□□□ 1.32
SSSCA1-207ENST00000533115 GPX8Q8TED1 209 aa23.29■■□□□ 1.32
SSSCA1-207ENST00000533115 ZNF2Q9BSG1 426 aaPredicted RBP23.29■■□□□ 1.32
SSSCA1-207ENST00000533115 MRPS26Q9BYN8 205 aaKnown RBP23.29■■□□□ 1.32
SSSCA1-207ENST00000533115 ANKRD34BA5PLL1 514 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 RBFOX2O43251 390 aaKnown RBP eCLIP23.28■■□□□ 1.322e-9■■■□□ 17.9
SSSCA1-207ENST00000533115 HPGDSO60760 199 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 ELK1P19419 428 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 MAS1LP35410 378 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 SSX9Q7RTT3 188 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 TTC9CQ8N5M4 171 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms