RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MIDNQ504T8 468 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 RNASE11Q8TAA1 199 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 RPEQ96AT9 228 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 PLSCR3Q9NRY6 295 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 AMMECR1Q9Y4X0 333 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 CSPG4Q6UVK1 2322 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 FXYD6-FXYD2A0A087WZ82 144 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 TRAV3A0A0B4J244 114 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 A0A1W2PPI3 338 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 LEUTXA8MZ59 168 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 SCGB1D2O95969 90 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 AVPP01185 164 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 OR9G9P0C7N8 305 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 SLC25A4P12235 298 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 SLC25A6P12236 298 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 LGALSLQ3ZCW2 172 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 OR1S1Q8NH92 325 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 MBD2Q9UBB5 411 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 NSG2Q9Y328 171 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 H7C2Y5 167 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 K7EPK0 472 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 S100A10P60903 97 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 ID3Q02535 119 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 FGL1Q08830 312 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 SMCO1Q147U7 214 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 RTL8BQ17RB0 113 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 MOB3BQ86TA1 216 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 C9orf62Q8N4C0 152 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 FAM71E2Q8N5Q1 922 aa17.69■□□□□ 0.42
PACSIN3-209ENST00000532457 J3QLI3 93 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 NQO2P16083 231 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 CXCL2P19875 107 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 KRTAP1-1Q07627 177 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 CLEC9AQ6UXN8 241 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 H2BFWTQ7Z2G1 175 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 SPIN2AQ99865 258 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 SPIN2BQ9BPZ2 258 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 MAGT1Q9H0U3 335 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 LSM5Q9Y4Y9 91 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 IGHV3OR16-10A0A075B7F0 116 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 LYL1P12980 280 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 TMEM177Q53S58 311 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 THOC7Q6I9Y2 204 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 DMBX1Q8NFW5 382 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 RHOVQ96L33 236 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 SMR3AQ99954 134 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 C7orf69Q9H7B7 122 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 AUP1Q9Y679 476 aa17.68■□□□□ 0.42
PACSIN3-209ENST00000532457 F8P00451 2351 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 PIGBOS1A0A0B4J2F0 54 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 LY6G6DO95868 133 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 APOA2P02652 100 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 POLR2GP62487 172 aaKnown RBP eCLIP17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 SSX2Q16385 188 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 ZNF546Q86UE3 836 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 RCL1Q9Y2P8 373 aaKnown RBP17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 WASHC3Q9Y3C0 194 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 TLN2Q9Y4G6 2542 aa17.67■□□□□ 0.42
PACSIN3-209ENST00000532457 HMSDA8MTL9 139 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 TIMM23O14925 209 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 DEDDO75618 318 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 ATG12O94817 140 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 IL6RP08887 468 aaPredicted RBP17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 RRASP10301 218 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 NKX2-1P43699 371 aaPredicted RBP17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 TAGLNQ01995 201 aaKnown RBP17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 FBLN7Q53RD9 439 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 DHRS7BQ6IAN0 325 aaPredicted RBP17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 PRSS54Q6PEW0 395 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 TMEM65Q6PI78 240 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 THAP6Q8TBB0 222 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 FLYWCH2Q96CP2 140 aaKnown RBP17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 C11orf1Q9H5F2 150 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 TMEM140Q9NV12 185 aa17.66■□□□□ 0.42
PACSIN3-209ENST00000532457 ARPC5O15511 151 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 MC5RP33032 325 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 POU2AF1Q16633 256 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 OR4A47Q6IF82 309 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 PDPNQ86YL7 162 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 CFHR4Q92496 578 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 YAE1D1Q9NRH1 226 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 TNFSF18Q9UNG2 199 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 POMT1Q9Y6A1 747 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 SHOXO15266 292 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 ST8SIA3O43173 380 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 IGLV2-23P01705 113 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 IGHV4-38-2P0DP08 117 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 SAA4P35542 130 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 LGALS4P56470 323 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 RELBQ01201 579 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 MINOS1Q5TGZ0 78 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 RUSC1-AS1Q66K80 236 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 COA4Q9NYJ1 87 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 HSPB11Q9Y547 144 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 SOX21Q9Y651 276 aaPredicted RBP17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 MINOS1-NBL1R4GNA1 71 aa17.65■□□□□ 0.42
PACSIN3-209ENST00000532457 NPFFO15130 113 aa17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 TMEM50AO95807 157 aa17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 CD24P25063 80 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms