RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 RHOVQ96L33 236 aa17.68■□□□□ 0.42
PPP1CA-207ENST00000532279 HSD17B10Q99714 261 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-207ENST00000532279 IFT46Q9NQC8 304 aa17.68■□□□□ 0.42
PPP1CA-207ENST00000532279 C13orf42A0A1B0GVH6 325 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 MSGN1A6NI15 193 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 TRIM64CA6NLI5 447 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 H3BUA1 57 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 HSPB1P04792 205 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 CBX5P45973 191 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 DEFA5Q01523 94 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 EIF4EBP1Q13541 118 aaPredicted RBP17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 CDK10Q15131 360 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 TMEM69Q5SWH9 247 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 VKORC1L1Q8N0U8 176 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 SRSF12Q8WXF0 261 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 TMEM68Q96MH6 324 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 ZNF430Q9H8G1 570 aaPredicted RBP17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 CCL28Q9NRJ3 127 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 COA4Q9NYJ1 87 aa17.67■□□□□ 0.42
PPP1CA-207ENST00000532279 MPPED1O15442 326 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 TNFSF12O43508 249 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 PPYP01298 95 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 FXYD4P59646 89 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 VBP1P61758 197 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 MFSD4AQ8N468 514 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 OR4S2Q8NH73 311 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 SLC25A46Q96AG3 418 aa17.66■□□□□ 0.42
PPP1CA-207ENST00000532279 ACTL6BO94805 426 aa17.65■□□□□ 0.42
PPP1CA-207ENST00000532279 TAS2R20P59543 309 aa17.65■□□□□ 0.42
PPP1CA-207ENST00000532279 ZNF66Q6ZN08 573 aa17.65■□□□□ 0.42
PPP1CA-207ENST00000532279 OR5AP2Q8NGF4 316 aa17.65■□□□□ 0.42
PPP1CA-207ENST00000532279 SLC5A7Q9GZV3 580 aa17.65■□□□□ 0.42
PPP1CA-207ENST00000532279 CREBL2O60519 120 aaPredicted RBP17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 SAP30O75446 220 aa17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 INSL3P51460 131 aa17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 BRWD1-AS2P59051 145 aa17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 C10orf55Q5SWW7 151 aa17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 TINAGL1Q9GZM7 467 aaPredicted RBP17.64■□□□□ 0.41
PPP1CA-207ENST00000532279 A0A0G2JLM5 398 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 ANKRD34BA5PLL1 514 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 LY86O95711 162 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 EIF4EP06730 217 aaKnown RBP17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 CD69Q07108 199 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 ZNF429Q86V71 674 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 TMEM17Q86X19 198 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 MMD2Q8IY49 270 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 COMMD3Q9UBI1 195 aa17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 ZNF256Q9Y2P7 627 aaPredicted RBP17.63■□□□□ 0.41
PPP1CA-207ENST00000532279 OR9G9P0C7N8 305 aa17.62■□□□□ 0.41
PPP1CA-207ENST00000532279 DCTN2Q13561 401 aaKnown RBP17.62■□□□□ 0.41
PPP1CA-207ENST00000532279 ADAD2Q8NCV1 583 aaKnown RBP17.62■□□□□ 0.41
PPP1CA-207ENST00000532279 KCTD12Q96CX2 325 aaKnown RBP17.62■□□□□ 0.41
PPP1CA-207ENST00000532279 EHFQ9NZC4 300 aa17.62■□□□□ 0.41
PPP1CA-207ENST00000532279 KBTBD11O94819 623 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 OR2A4O95047 310 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 SMIM18P0DKX4 95 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 HERV-K104P61576 105 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 MSMO1Q15800 293 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 ACSM6Q6P461 480 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 SSX9Q7RTT3 188 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 ZBTB34Q8NCN2 500 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 VSTM2AQ8TAG5 236 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 GIMAP1Q8WWP7 306 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 OR2A7Q96R45 310 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 B9D2Q9BPU9 175 aa17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 RANGRFQ9HD47 186 aaPredicted RBP17.61■□□□□ 0.41
PPP1CA-207ENST00000532279 SULT1C2O00338 296 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 PMP2P02689 132 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 PRH1P02810 166 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 PRSS3P35030 304 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 KIR2DS2P43631 304 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 RFX2P48378 723 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 DYRK1AQ13627 763 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 ZNF818PQ6ZRF7 136 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 SPAG16Q8N0X2 631 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 SPIN2AQ99865 258 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 SPIN2BQ9BPZ2 258 aa17.6■□□□□ 0.41
PPP1CA-207ENST00000532279 RBMXL2O75526 392 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 BRI3O95415 125 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 HRASP01112 189 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 ZP3P21754 424 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 CATR1Q13166 79 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 C11orf87Q6NUJ2 197 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 PUSL1Q8N0Z8 303 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 USMG5Q96IX5 58 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 NAA50Q9GZZ1 169 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 ANAPC10Q9UM13 185 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 LSM4Q9Y4Z0 139 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 SORL1Q92673 2214 aa17.59■□□□□ 0.41
PPP1CA-207ENST00000532279 SMIM31A0A1B0GVY4 71 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 HMX3A6NHT5 357 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 OR5H2Q8NGV7 314 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 OR51H1Q8NH63 302 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 TMEM167AQ8TBQ9 72 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 FYTTD1Q96QD9 318 aaKnown RBP17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 OR4C12Q96R67 309 aa17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 ZNF2Q9BSG1 426 aaPredicted RBP17.58■□□□□ 0.4
PPP1CA-207ENST00000532279 HPGDSO60760 199 aa17.57■□□□□ 0.4
PPP1CA-207ENST00000532279 TRBV12-3P01733 135 aa17.57■□□□□ 0.4
PPP1CA-207ENST00000532279 APOA1P02647 267 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms