RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 TIMM50Q3ZCQ8 353 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 OLFML2AQ68BL7 652 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 FAM53AQ6NSI3 398 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 Q6ZSV7 163 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 Q6ZTK2 550 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 NR2C2APQ86WQ0 139 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 TMEM219Q86XT9 240 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 C8orf31Q8N9H6 132 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 LINC01006Q8NI28 216 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 GLYATL2Q8WU03 294 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 CAPSLQ8WWF8 208 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 PTX4Q96A99 478 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 GALMQ96C23 342 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 RAB3CQ96E17 227 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 ARHGAP5-AS1Q96IT6 56 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 CYYR1Q96J86 154 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 NDUFAF3Q9BU61 184 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 FUNDC2Q9BWH2 189 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 ATG5Q9H1Y0 275 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 C16orf95Q9H693 158 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 RNF167Q9H6Y7 350 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR2S2Q9NQN1 319 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 PIPOXQ9P0Z9 390 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 AK3Q9UIJ7 227 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 DAPK2Q9UIK4 370 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 JPT1Q9UK76 154 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 TMED3Q9Y3Q3 217 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 RNF114Q9Y508 228 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 DNHD1Q96M86 4753 aa4.62□□□□□ -1.67
HMGB1P42-201ENST00000532126 A0A1W2PPI3 338 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 RNF222A6NCQ9 220 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 HSD17B6O14756 317 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 TIMM23O14925 209 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 AIREO43918 545 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 GAPDHP04406 335 aaKnown RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 CD3GP09693 182 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 STAG3L2P0CL84 134 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 UCP1P25874 307 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 KIR2DS4P43632 304 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 REG1BP48304 166 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 SLURP1P55000 103 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 TMEM50BP56557 158 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 SEC61GP60059 68 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 LSM3P62310 102 aaKnown RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 COTL1Q14019 142 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 DIAPH2-AS1Q14236 149 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 GNMTQ14749 295 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 HMGN3Q15651 99 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 CTF1Q16619 201 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 MOGAT2Q3SYC2 334 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 IDNKQ5T6J7 187 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR4A47Q6IF82 309 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 SFXN4Q6P4A7 337 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 MOB1BQ7L9L4 216 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 LINC00311Q8N616 119 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 DRAM1Q8N682 238 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR10R2Q8NGX6 335 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR56B4Q8NH76 319 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR2T6Q8NHC8 308 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 IL1F10Q8WWZ1 152 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 YIPF6Q96EC8 236 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 AKR1E2Q96JD6 320 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 S1PR3Q99500 378 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 CMSS1Q9BQ75 279 aaKnown RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 HDHD3Q9BSH5 251 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 PECRQ9BY49 303 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 RANBP3Q9H6Z4 567 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 GEMIN7Q9H840 131 aaKnown RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 AURKAIP1Q9NWT8 199 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 MGAT4AQ9UM21 535 aa4.61□□□□□ -1.67
HMGB1P42-201ENST00000532126 TRBV6-6A0A0A6YYG2 114 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 TRAV25A0A0B4J276 109 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SMCO3A2RU48 225 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 LINC00473A8K010 186 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SERPINE3A8MV23 424 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 TRDCB7Z8K6 153 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 NPIPB6E9PJ23 425 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 H3BTX0 84 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 MFNGO00587 321 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SLC31A2O15432 143 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 YPEL1O60688 119 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR2F2O95006 317 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 GNB3P16520 340 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZBTB25P24278 435 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 PPP1CCP36873 323 aaKnown RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 TALDO1P37837 337 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 PROK1P58294 105 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 HLA-DRB3P79483 266 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZNF816Q0VGE8 651 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ARFRP1Q13795 201 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 HES1Q14469 280 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ARL6IP1Q15041 203 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 USF2Q15853 346 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 MORN2Q502X0 79 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 CT45A1Q5HYN5 189 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms