RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SLC25A22Q9H936 323 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
BRCA2-204ENST00000530893 TRGV8A0A0C4DH27 118 aa14.23□□□□□ -0.13
BRCA2-204ENST00000530893 TCF15Q12870 199 aa14.23□□□□□ -0.13
BRCA2-204ENST00000530893 RPL39P5Q59GN2 51 aa14.23□□□□□ -0.13
BRCA2-204ENST00000530893 RAB24Q969Q5 203 aa14.23□□□□□ -0.13
BRCA2-204ENST00000530893 ADTRPQ96IZ2 230 aa14.23□□□□□ -0.13
BRCA2-204ENST00000530893 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 CXCL1P09341 107 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 CD40P25942 277 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 THBS3P49746 956 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 RELBQ01201 579 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 SPINK9Q5DT21 86 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 ZNF343Q6P1L6 599 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 C1orf87Q8N0U7 546 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 RAB1CQ92928 201 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 LINC00574Q9H8X3 128 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 DOCK11Q5JSL3 2073 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 SMCO3A2RU48 225 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 PCP4L1A6NKN8 68 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 SEC14L6B5MCN3 397 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 KLK10O43240 276 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 KBTBD11O94819 623 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 OPN1MWP04001 364 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 OPN1MW2P0DN77 364 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 OPN1MW3P0DN78 364 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 VDAC2P45880 294 aaPredicted RBP14.22□□□□□ -0.13
BRCA2-204ENST00000530893 PLPPR2Q96GM1 343 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 SMIM7Q9BQ49 75 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 HEYLQ9NQ87 328 aaPredicted RBP14.22□□□□□ -0.13
BRCA2-204ENST00000530893 TMEM140Q9NV12 185 aa14.22□□□□□ -0.13
BRCA2-204ENST00000530893 HCFC1P51610 2035 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 ASPMQ8IZT6 3477 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 IFNA10P01566 189 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 CDC34P49427 236 aaPredicted RBP14.21□□□□□ -0.13
BRCA2-204ENST00000530893 FAM27E3Q08E93 113 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 KIAA0141Q14154 515 aaPredicted RBP14.21□□□□□ -0.13
BRCA2-204ENST00000530893 TMEM241Q24JQ0 296 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 SSX9Q7RTT3 188 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 Q8N7P7 452 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 URGCP-MRPS24S4R325 110 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 DSCAML1Q8TD84 2053 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
BRCA2-204ENST00000530893 ZNF729A6NN14 1252 aaPredicted RBP14.2□□□□□ -0.14
BRCA2-204ENST00000530893 DLL1O00548 723 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 ATXN7O15265 892 aaPredicted RBP14.2□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF674Q2M3X9 581 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 CT45A1Q5HYN5 189 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TMEM108Q6UXF1 575 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 SSX8Q7RTT4 187 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 CT45A3Q8NHU0 189 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 CORO2AQ92828 525 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 CFAP47Q6ZTR5 3102 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TRBV24-1A0A075B6N3 115 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TGIF2-C20orf24A0A0A6YYL0 155 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 C15orf61A6NNL5 157 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 MKRN2OSH3BPM6 223 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 GFRA3O60609 400 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 IRF2P14316 349 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TLE1Q04724 770 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 HNF4GQ14541 408 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF788Q6ZQV5 615 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 GAFA1Q96PS6 74 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 ELOVL5Q9NYP7 299 aa14.2□□□□□ -0.14
BRCA2-204ENST00000530893 DSPP15924 2871 aaKnown RBP14.2□□□□□ -0.14
BRCA2-204ENST00000530893 TANC2Q9HCD6 1990 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 DSCAMO60469 2012 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 PRSS46E5RG02 174 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 SLC31A2O15432 143 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 BMP5P22003 454 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 OPRK1P41145 380 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 FAM210BQ96KR6 192 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 TMPRSS5Q9H3S3 457 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 KCNIP2Q9NS61 270 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 FOXA2Q9Y261 457 aaPredicted RBP14.19□□□□□ -0.14
BRCA2-204ENST00000530893 CADP27708 2225 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 SAA2-SAA4A0A096LPE2 208 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 K7EM74 188 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 SAA2P0DJI9 122 aaPredicted RBP14.19□□□□□ -0.14
BRCA2-204ENST00000530893 RPS16P62249 146 aaKnown RBP14.19□□□□□ -0.14
BRCA2-204ENST00000530893 POU2AF1Q16633 256 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF439Q8NDP4 499 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 IDI2-AS1Q9NZ38 188 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 TCF19Q9Y242 345 aa14.19□□□□□ -0.14
BRCA2-204ENST00000530893 PRRG2O14669 202 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 HMGB3O15347 200 aaKnown RBP14.18□□□□□ -0.14
BRCA2-204ENST00000530893 HOXA5P20719 270 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 MRPS11P82912 194 aaKnown RBP14.18□□□□□ -0.14
BRCA2-204ENST00000530893 FAM201AQ5SY85 155 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 TREML4Q6UXN2 200 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 VKORC1L1Q8N0U8 176 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 RHOVQ96L33 236 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 TMEM14BQ9NUH8 114 aa14.18□□□□□ -0.14
BRCA2-204ENST00000530893 VENTXO95231 258 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 HRASP01112 189 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 SELLP14151 372 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 TNFRSF1AP19438 455 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 BSXQ3C1V8 233 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 OR4F5Q8NH21 305 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms