RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 CLCF1Q9UBD9 225 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 J3QR06 171 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 MGST3O14880 152 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
BDNF-215ENST00000530861 MSMPQ1L6U9 139 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 RBMS3Q6XE24 437 aaKnown RBP10.52□□□□□ -0.73
BDNF-215ENST00000530861 COLCA1Q6ZS62 124 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 C18orf12Q96KH6 178 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 TMEM140Q9NV12 185 aa10.52□□□□□ -0.73
BDNF-215ENST00000530861 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 PPIAL4DF5H284 164 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 SS18L1O75177 396 aaPredicted RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 MMP23AO75900 390 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 CD3EP07766 207 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 SEC11BP0C7V7 166 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 FOXL2NBQ6ZUU3 175 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 SAT2Q96F10 170 aaPredicted RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 FAM103A1Q9BTL3 118 aaKnown RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 ACTR3CQ9C0K3 210 aaPredicted RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 UBTD1Q9HAC8 227 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 MYOZ1Q9NP98 299 aaPredicted RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 PPIAL4AQ9Y536 164 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
BDNF-215ENST00000530861 FAM157CP0CG43 387 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 DBX2Q6ZNG2 339 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 MOB1BQ7L9L4 216 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 OR6C3Q9NZP0 311 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 NCKAP5O14513 1909 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 A0A1B0GU03 582 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 H0Y8G0 127 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 TNFSF13O75888 250 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 LGALS4P56470 323 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 RTL8BQ17RB0 113 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 Q6P435 159 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 RAB24Q969Q5 203 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 Q9UFV3 132 aa10.51□□□□□ -0.73
BDNF-215ENST00000530861 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 DANCRP0C864 163 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 CDKN1AP38936 164 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 GNB2P62879 340 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 ZNF645Q8N7E2 425 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 MRPS18CQ9Y3D5 142 aaKnown RBP10.5□□□□□ -0.73
BDNF-215ENST00000530861 hADV38S2A0JD32 116 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 RBP4P02753 201 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 CD82P27701 267 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
BDNF-215ENST00000530861 C19orf35Q6ZS72 473 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
BDNF-215ENST00000530861 SNX22Q96L94 193 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 PARP11Q9NR21 331 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 LRBAP50851 2863 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 IGKV1D-17A0A075B6S4 117 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 PRSS44E7EML9 344 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 C17orf112F2Z3M2 114 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 RRHO14718 337 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 GLRXP35754 106 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
BDNF-215ENST00000530861 NDUFB4O95168 129 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 ARSJQ5FYB0 599 aaPredicted RBP10.49□□□□□ -0.73
BDNF-215ENST00000530861 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 OR13D1Q8NGV5 346 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 ASB13Q8WXK3 278 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
BDNF-215ENST00000530861 SEC11CQ9BY50 192 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 TIMM23BQ5SRD1 257 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 DKK4Q9UBT3 224 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.49□□□□□ -0.73
BDNF-215ENST00000530861 IGKV1-39P01597 117 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 IGLV3-1P01715 115 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 IGHV1-46P01743 117 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 IGKV1D-39P04432 117 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 CD1BP29016 333 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 PSG5Q15238 335 aa10.49□□□□□ -0.73
BDNF-215ENST00000530861 A8MXE2 369 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 TRGC2P03986 189 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 HLA-GP17693 338 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 B2MP61769 119 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 ZNF585BQ52M93 769 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 NUDT16L1Q9BRJ7 211 aaKnown RBP10.48□□□□□ -0.73
BDNF-215ENST00000530861 DPRXA6NFQ7 191 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 C11orf94C9JXX5 98 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 FABP4P15090 132 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 RPEQ96AT9 228 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 UHRF2Q96PU4 802 aa10.48□□□□□ -0.73
BDNF-215ENST00000530861 ZNF835Q9Y2P0 537 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms