RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SFT2D2O95562 160 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 DUS4LO95620 317 aaKnown RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 CDS2O95674 445 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 IGLV2-14P01704 120 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 IGHV4-59P01825 116 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 IL5P05113 134 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 OR4E1P0C645 316 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 VDAC1P21796 283 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 COMPP49747 757 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 CCR6P51684 374 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 RIPPLY3P57055 190 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 UBA52P62987 128 aaKnown RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 EIF4EBP1Q13541 118 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 H2BFWTQ7Z2G1 175 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 PPP1R27Q86WC6 154 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 BCL6BQ8N143 479 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 Q8N6K4 173 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 LRTM2Q8N967 370 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 DRAXINQ8NBI3 349 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 OR4F5Q8NH21 305 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 OR4A16Q8NH70 328 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 CHPT1Q8WUD6 406 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 LSM10Q969L4 123 aaKnown RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM56Q96MV1 263 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 SRSF8Q9BRL6 282 aaKnown RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 RTBDNQ9BSG5 229 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-211ENST00000528787 MARVELD1Q9BSK0 173 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 COMMD5Q9GZQ3 224 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 SHPKQ9UHJ6 478 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 PRNDQ9UKY0 176 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 TBC1D24Q9ULP9 559 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 TMED3Q9Y3Q3 217 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM56-RWDD3S4R434 201 aa6.36□□□□□ -1.39
SSBP3-211ENST00000528787 INMT-MINDY4F8WBC2 141 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 RBMXL2O75526 392 aaKnown RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 KBTBD11O94819 623 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 SCAF4O95104 1147 aaKnown RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 NDUFA7O95182 113 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 CNIH1O95406 144 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 HLA-DRB1P01911 266 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 SLC25A6P12236 298 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 BTCP35070 178 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 LPAR6P43657 344 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 SLC35B1P78383 322 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 CYCSP99999 105 aaKnown RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 PRB3Q04118 309 aaPredicted RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 FOXL1Q12952 345 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 C5orf64Q2M2E5 130 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF562Q6V9R5 426 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 GLDNQ6ZMI3 551 aaPredicted RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 C5orf24Q7Z6I8 188 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 NOXA1Q86UR1 476 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 COMMD1Q8N668 190 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 OR5B3Q8NH48 314 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 ASB13Q8WXK3 278 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM158Q8WZ71 300 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 R3HDM4Q96D70 268 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 BEX1Q9HBH7 125 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 COA4Q9NYJ1 87 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 METTL1Q9UBP6 276 aaKnown RBP6.35□□□□□ -1.39
SSBP3-211ENST00000528787 VSIG4Q9Y279 399 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF257Q9Y2Q1 563 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 MMP24Q9Y5R2 645 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 MTORP42345 2549 aa6.35□□□□□ -1.39
SSBP3-211ENST00000528787 TRAV6A0A075B6T7 132 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 IGHV3-72A0A0B4J1Y9 119 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 C9orf170A2RU37 121 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 AP4M1O00189 453 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 GPR137BO60478 399 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 PROP1O75360 226 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 MED6O75586 246 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 KRASP01116 189 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 IGKV1-16P04430 117 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 OR5AC1P0C628 307 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 PI3P19957 117 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 F2RL1P55085 397 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 ATP5IP56385 69 aaPredicted RBP6.34□□□□□ -1.39
SSBP3-211ENST00000528787 RPL8P62917 257 aaKnown RBP6.34□□□□□ -1.39
SSBP3-211ENST00000528787 DHRS2Q13268 280 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 DIAPH2-AS1Q14236 149 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 HNF4GQ14541 408 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 PSG5Q15238 335 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 LY6EQ16553 131 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 OR2B11Q5JQS5 317 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 FAM209BQ5JX69 171 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 LDLRAD2Q5SZI1 272 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 FAM53AQ6NSI3 398 aaPredicted RBP6.34□□□□□ -1.39
SSBP3-211ENST00000528787 NRARPQ7Z6K4 114 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF429Q86V71 674 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 DYNAPQ8N1N2 210 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 FAM71E2Q8N5Q1 922 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 C5orf56Q8N8D9 126 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 OR1L6Q8NGR2 347 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 TMEM167AQ8TBQ9 72 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF431Q8TF32 576 aaPredicted RBP6.34□□□□□ -1.39
SSBP3-211ENST00000528787 C17orf50Q8WW18 174 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 CYYR1Q96J86 154 aa6.34□□□□□ -1.39
SSBP3-211ENST00000528787 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms