RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 C9orf152Q5JTZ5 239 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 RASL11BQ9BPW5 248 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 KIAA1456Q9P272 454 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 VSIG4Q9Y279 399 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 TRRAPQ9Y4A5 3859 aa13.14□□□□□ -0.31
SMCO4-204ENST00000527149 PLA2G10O15496 165 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 S1PR2O95136 353 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 ZNF846Q147U1 533 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 POU2AF1Q16633 256 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 WDR12Q9GZL7 423 aaKnown RBP13.13□□□□□ -0.31
SMCO4-204ENST00000527149 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 FAM212BQ9NTI7 297 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-204ENST00000527149 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
SMCO4-204ENST00000527149 MPPED1O15442 326 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 SLC35E3Q7Z769 313 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 PUSL1Q8N0Z8 303 aaKnown RBP13.12□□□□□ -0.31
SMCO4-204ENST00000527149 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 C7orf50Q9BRJ6 194 aaKnown RBP13.12□□□□□ -0.31
SMCO4-204ENST00000527149 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
SMCO4-204ENST00000527149 H0Y980 276 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 KCNAB3O43448 404 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 HPRT1P00492 218 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 CA2P00918 260 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 IGF1P05019 195 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 S100GP29377 79 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 TAS2R31P59538 309 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 CX3CL1P78423 397 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 VMA21Q3ZAQ7 101 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 PPP1R27Q86WC6 154 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 TEX45Q8NA69 505 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 POC5Q8NA72 575 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 RHOVQ96L33 236 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 NOL4LQ96MY1 436 aaPredicted RBP13.11□□□□□ -0.31
SMCO4-204ENST00000527149 TP53RKQ96S44 253 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 OR51J1Q9H342 316 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 WNK1Q9H4A3 2382 aa13.11□□□□□ -0.31
SMCO4-204ENST00000527149 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 NAP1L6A6NFF2 107 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 ARPC1BO15143 372 aaKnown RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 INPP1P49441 399 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 CCR6P51684 374 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 CRIP2P52943 208 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 IFITM3Q01628 133 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 CFHR3Q02985 330 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 PLGLAQ15195 96 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 PRSS8Q16651 343 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 C10orf99Q6UWK7 81 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 CCDC71LQ8N9Z2 235 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 ADAD2Q8NCV1 583 aaKnown RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 COPZ2Q9P299 210 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 TBC1D24Q9ULP9 559 aa13.1□□□□□ -0.31
SMCO4-204ENST00000527149 C14orf166Q9Y224 244 aaKnown RBP13.1□□□□□ -0.31
SMCO4-204ENST00000527149 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 AP4M1O00189 453 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 UPK1BO75841 260 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 HRASP01112 189 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 LPAR6P43657 344 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
SMCO4-204ENST00000527149 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 STPG2Q8N412 459 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 TMEM167AQ8TBQ9 72 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 R3HDM4Q96D70 268 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 CLCC1Q96S66 551 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 CITED1Q99966 193 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
SMCO4-204ENST00000527149 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 ZNF430Q9H8G1 570 aaPredicted RBP13.09□□□□□ -0.31
SMCO4-204ENST00000527149 BET1LQ9NYM9 111 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 PKD1L1Q8TDX9 2849 aa13.09□□□□□ -0.31
SMCO4-204ENST00000527149 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 HAX1O00165 279 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 LYRM1O43325 122 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 KBTBD11O94819 623 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 NDUFB6O95139 128 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 NQO2P16083 231 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 UCP1P25874 307 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
SMCO4-204ENST00000527149 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
SMCO4-204ENST00000527149 OR4A47Q6IF82 309 aa13.08□□□□□ -0.32
SMCO4-204ENST00000527149 SSX9Q7RTT3 188 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms