RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ADAP1O75689 374 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 RAB13P51153 203 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 ARHGDIBP52566 201 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 CYCSP99999 105 aaKnown RBP10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 C2orf68Q2NKX9 166 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 GGNBP1Q5YKI7 109 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 CCDC144NLQ6NUI1 221 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 RBMS3Q6XE24 437 aaKnown RBP10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 LYZL2Q7Z4W2 148 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 MOB3BQ86TA1 216 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 OR8H3Q8N146 312 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 SLC35G3Q8N808 338 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 OR5AN1Q8NGI8 311 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 OR5M8Q8NGP6 311 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 LHFPL5Q8TAF8 219 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 ASB13Q8WXK3 278 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 MALSU1Q96EH3 234 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 RRNAD1Q96FB5 475 aaKnown RBP10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 DUX5Q96PT3 197 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 SPIN2AQ99865 258 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 SPIN2BQ9BPZ2 258 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 PLEKHA2Q9HB19 425 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 COMMD9Q9P000 198 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 TRAV40A0A0B4J280 105 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 IGHV1-69DA0A0B4J2H0 117 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 CLDN34H7C241 214 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 S1PR2O95136 353 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 SIX6O95475 246 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 IGHV1-69P01742 117 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 GIPP09681 153 aaPredicted RBP10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 HKR1P10072 659 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 VDAC1P21796 283 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 AKR1C2P52895 323 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 ERVK-16P61578 105 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 LHFPL4Q7Z7J7 247 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 PDPNQ86YL7 162 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 LSM10Q969L4 123 aaKnown RBP10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 NEURL2Q9BR09 285 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 CHIAQ9BZP6 476 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 WASHC3Q9Y3C0 194 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 HILPDAQ9Y5L2 63 aa10.21□□□□□ -0.77
SSSCA1-203ENST00000526877 MDFIC2A0A1B0GVS7 189 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 H0YJW9 148 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 OR2A4O95047 310 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 CRYZL1O95825 349 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 HRASP01112 189 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 IGKV1-39P01597 117 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 IGKV1D-39P04432 117 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 RNASE1P07998 156 aaKnown RBP10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 NQO2P16083 231 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 SAA4P35542 130 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 BPIFB3P59826 476 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 RAP2BP61225 183 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 SSX2Q16385 188 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 AWAT1Q58HT5 328 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 THOC7Q6I9Y2 204 aaKnown RBP10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 FAM219AQ8IW50 185 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 FLYWCH2Q96CP2 140 aaKnown RBP10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 R3HDM4Q96D70 268 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 C2orf50Q96LR7 162 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 OR2A7Q96R45 310 aa10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 RANGRFQ9HD47 186 aaPredicted RBP10.2□□□□□ -0.78
SSSCA1-203ENST00000526877 SHOXO15266 292 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 KRASP01116 189 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 CD1BP29016 333 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 G6PCP35575 357 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 H2BFSP57053 126 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 IAH1Q2TAA2 248 aaPredicted RBP10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 LDLRAD2Q5SZI1 272 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 H2BFWTQ7Z2G1 175 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 C3orf56Q8N813 242 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 DMBX1Q8NFW5 382 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 OR4C13Q8NGP0 309 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 OSR1Q8TAX0 266 aaPredicted RBP10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 PPP1R14BQ96C90 147 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 SEC22AQ96IW7 307 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 OR10C1Q96KK4 312 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 NMES1Q9C002 83 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 RANBP3Q9H6Z4 567 aaPredicted RBP10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 MMP24Q9Y5R2 645 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 MGAM2Q2M2H8 2515 aa10.19□□□□□ -0.78
SSSCA1-203ENST00000526877 PKD1L1Q8TDX9 2849 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 A0A1B0GU03 582 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 A0A1W2PPI3 338 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 TIMM23O14925 209 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 IGKV1-5P01602 117 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 SLC25A6P12236 298 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 BRS3P32247 399 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 FOXL1Q12952 345 aa10.18□□□□□ -0.78
SSSCA1-203ENST00000526877 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms