RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 OR2C3Q8N628 320 aa16.62■□□□□ 0.25
SMCO4-203ENST00000526869 OR8H1Q8NGG4 311 aa16.62■□□□□ 0.25
SMCO4-203ENST00000526869 LHX4Q969G2 390 aa16.62■□□□□ 0.25
SMCO4-203ENST00000526869 SLC25A31Q9H0C2 315 aa16.62■□□□□ 0.25
SMCO4-203ENST00000526869 ARID1AO14497 2285 aa16.62■□□□□ 0.25
SMCO4-203ENST00000526869 HELZ2Q9BYK8 2649 aaKnown RBP16.62■□□□□ 0.25
SMCO4-203ENST00000526869 CENPEQ02224 2701 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 SPG11Q96JI7 2443 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 FBN2P35556 2912 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 LEUTXA8MZ59 168 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 FAM157AC9JC47 383 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 KCNAB3O43448 404 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 ARG1P05089 322 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 IL6RP08887 468 aaPredicted RBP16.61■□□□□ 0.25
SMCO4-203ENST00000526869 OR9G9P0C7N8 305 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 HTR1DP28221 377 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 REG1BP48304 166 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 DLX1P56177 255 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 RPL23AP62750 156 aaKnown RBP16.61■□□□□ 0.25
SMCO4-203ENST00000526869 CLEC12BQ2HXU8 276 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 PDLIM3Q53GG5 364 aaPredicted RBP16.61■□□□□ 0.25
SMCO4-203ENST00000526869 TPTE2P1Q5T6R2 138 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 ZNF429Q86V71 674 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 OR4C13Q8NGP0 309 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 OR52E5Q8NH55 327 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 RPEQ96AT9 228 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 SMIM8Q96KF7 97 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 MMP26Q9NRE1 261 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 DPM3Q9P2X0 92 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
SMCO4-203ENST00000526869 INSIG2Q9Y5U4 225 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 CRYBG3Q68DQ2 2970 aa16.61■□□□□ 0.25
SMCO4-203ENST00000526869 IGHV1-3A0A0C4DH29 117 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 OOSP1A8MZH6 123 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 H7C2Y5 167 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 IFNA7P01567 189 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 IGKV1-16P04430 117 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 HOXB4P17483 251 aaPredicted RBP16.6■□□□□ 0.25
SMCO4-203ENST00000526869 PAX9P55771 341 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 UBE2KP61086 200 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 RELBQ01201 579 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 DEFB113Q30KQ7 82 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 MINOS1Q5TGZ0 78 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 OR4A47Q6IF82 309 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 ZNF680Q8NEM1 530 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 OR4A16Q8NH70 328 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 STOML3Q8TAV4 291 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 FLYWCH2Q96CP2 140 aaKnown RBP16.6■□□□□ 0.25
SMCO4-203ENST00000526869 MBD6Q96DN6 1003 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 C1orf159Q96HA4 380 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 MINOS1-NBL1R4GNA1 71 aa16.6■□□□□ 0.25
SMCO4-203ENST00000526869 SHOXO15266 292 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 TOX4O94842 621 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 TMEM50AO95807 157 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 BAXQ07812 192 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 SSX9Q7RTT3 188 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 OR8H3Q8N146 312 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 HARBI1Q96MB7 349 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 CIB3Q96Q77 187 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-203ENST00000526869 TBX15Q96SF7 602 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 RBKSQ9H477 322 aa16.59■□□□□ 0.25
SMCO4-203ENST00000526869 FOXA2Q9Y261 457 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-203ENST00000526869 PTPN13Q12923 2485 aa16.58■□□□□ 0.25
SMCO4-203ENST00000526869 C15orf61A6NNL5 157 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 RNASEK-C17orf49H0YIS7 233 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 NXPH3O95157 252 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 FGF2P09038 288 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 USF1P22415 310 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-203ENST00000526869 CAV2P51636 162 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 SPCS3P61009 180 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 EWSR1Q01844 656 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMCO4-203ENST00000526869 PAX8Q06710 450 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 KLRD1Q13241 179 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 VKORC1L1Q8N0U8 176 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 PUSL1Q8N0Z8 303 aaKnown RBP16.58■□□□□ 0.24
SMCO4-203ENST00000526869 TMEM252Q8N6L7 170 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 OR4A5Q8NH83 315 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 ZNF471Q9BX82 626 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-203ENST00000526869 CYTL1Q9NRR1 136 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 TMEM14BQ9NUH8 114 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 PRNDQ9UKY0 176 aa16.58■□□□□ 0.24
SMCO4-203ENST00000526869 TBL2Q9Y4P3 447 aaKnown RBP16.58■□□□□ 0.24
SMCO4-203ENST00000526869 ANKRD17O75179 2603 aaKnown RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 FASNP49327 2511 aaKnown RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 A0A1W2PPI3 338 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 IGSF23A1L1A6 192 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 UPK2O00526 184 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 RBMXL2O75526 392 aaKnown RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 LGALS7P47929 136 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 UBE2E1P51965 193 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 EIF5AP63241 154 aaKnown RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 PRB3Q04118 309 aaPredicted RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 VSTM2AQ8TAG5 236 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 ST8SIA2Q92186 375 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 PHYHIPLQ96FC7 376 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 RNF5Q99942 180 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 QTRT1Q9BXR0 403 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms