RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 M0QYG6 137 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 TNFSF8P32971 234 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 CDX1P47902 265 aaPredicted RBP12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 SSBP2P81877 361 aaPredicted RBP12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 DGCR2P98153 550 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 PRSS8Q16651 343 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 ACTBL2Q562R1 376 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 PYHIN1Q6K0P9 492 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 TMEM65Q6PI78 240 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 IDO2Q6ZQW0 420 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 C8orf86Q6ZUL3 223 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 ZNF695Q8IW36 515 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 SPAG16Q8N0X2 631 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 KLHL30-AS1Q8NEE0 82 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 GRPEL2Q8TAA5 225 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
SSSCA1-202ENST00000526433 A0A1W2PN81 502 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 SOX15O60248 233 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 PF4P02776 101 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 CD3DP04234 171 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 IFNA6P05013 189 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 SAA1P0DJI8 122 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 SLC6A1P30531 599 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 CHRNA7P36544 502 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 RAB9AP51151 201 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 CATR1Q13166 79 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 IL18Q14116 193 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 KIAA0141Q14154 515 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 VKORC1L1Q8N0U8 176 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 TCTEX1D1Q8N7M0 179 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
SSSCA1-202ENST00000526433 ZNF701M0R085 212 aaPredicted RBP12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 GPR31O00270 319 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 RAMP3O60896 148 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 HRASP01112 189 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 RNASE10Q5GAN6 216 aaKnown RBP12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 LPCAT3Q6P1A2 487 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 CMTM1Q8IZ96 169 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 ZNF491Q8N8L2 437 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 OR51H1Q8NH63 302 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 SOSTQ9BQB4 213 aa12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
SSSCA1-202ENST00000526433 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 CTDSPLO15194 276 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 RBFOX2O43251 390 aaKnown RBP eCLIP12.64□□□□□ -0.392e-9■■■□□ 17.9
SSSCA1-202ENST00000526433 OR2A4O95047 310 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 CD33P20138 364 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 MYCNOSP40205 109 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 UCP3P55916 312 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 TAS2R19P59542 299 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 SSBP1Q04837 148 aaKnown RBP12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 TNXAQ16473 311 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 ETV3LQ6ZN32 361 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 POC5Q8NA72 575 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 OR5T1Q8NG75 326 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 OR5M8Q8NGP6 311 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 SMIM4Q8WVI0 70 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 RHOVQ96L33 236 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 OR2A7Q96R45 310 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 RSRP1Q9BUV0 290 aa12.64□□□□□ -0.39
SSSCA1-202ENST00000526433 MSGN1A6NI15 193 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 HPRT1P00492 218 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 CD74P04233 296 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 TBPP20226 339 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 PHLDA2Q53GA4 152 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 STEAP1BQ6NZ63 245 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 SSX9Q7RTT3 188 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 VSTM2AQ8TAG5 236 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 RAX2Q96IS3 184 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 MS4A10Q96PG2 267 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 DUX3Q96PT4 197 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
SSSCA1-202ENST00000526433 G3V4G9 280 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 CCL24O00175 119 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 CREBL2O60519 120 aaPredicted RBP12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 ACTL6BO94805 426 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 KBTBD11O94819 623 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 RAB3DO95716 219 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 RLN1P04808 185 aa12.62□□□□□ -0.39
SSSCA1-202ENST00000526433 F2RP25116 425 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms