RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 KBTBD11-OT1A0A1B0GTJ5 212 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 UBE2L5PA0A1B0GUS4 154 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 NKX6-3A6NJ46 265 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 HPRT1P00492 218 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 GYPAP02724 150 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 CD55P08174 381 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 LINC00205P59089 165 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 PNRC1Q12796 327 aaPredicted RBP11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 C17orf58Q2M2W7 97 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 TEX36Q5VZQ5 186 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 CENPVQ7Z7K6 275 aaPredicted RBP11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 CCL13Q99616 98 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 GFOD1Q9NXC2 390 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
LDLRAD3-202ENST00000524419 ICE1Q9Y2F5 2266 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 IFNA1P01562 189 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 ERVK-16P61578 105 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 ELOBQ15370 118 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 RPL39P5Q59GN2 51 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 FAM90A2PQ658T7 463 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 LCN15Q6UWW0 184 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 MSRB2Q9Y3D2 182 aa11.38□□□□□ -0.59
LDLRAD3-202ENST00000524419 C17orf100A8MU93 164 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZG16O60844 167 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 IGHV3-7P01780 117 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 FAM87AP0C7U9 286 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 NQO2P16083 231 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF134P52741 427 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 TMPRSS3P57727 454 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 RAB11AP62491 216 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 CCL8P80075 99 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 PRAMEF5Q5TYX0 476 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 RBMS3Q6XE24 437 aaKnown RBP11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 FAM216BQ8N7L0 139 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 RND1Q92730 232 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 S1PR3Q99500 378 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 TMEM147Q9BVK8 224 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 VAX2Q9UIW0 290 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 GAB2Q9UQC2 676 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZFP92A6NM28 416 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF729A6NN14 1252 aaPredicted RBP11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 VSTM5A8MXK1 200 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 SLC31A2O15432 143 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 PROP1O75360 226 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 B2MP61769 119 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 TMEM30BQ3MIR4 351 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 Q8WTZ3 238 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 NGBQ9NPG2 151 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
LDLRAD3-202ENST00000524419 MAP1LC3B2A6NCE7 125 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 LY86O95711 162 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 OR9G9P0C7N8 305 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 SSX7Q7RTT5 188 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 OR10P1Q8NGE3 313 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 OR4S2Q8NH73 311 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 NANPQ8TBE9 248 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 LEAP2Q969E1 77 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 MAP1LC3BQ9GZQ8 125 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 DOCK11Q5JSL3 2073 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 TLE1Q04724 770 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 SPINK9Q5DT21 86 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 TCF23Q7RTU1 214 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 TGIF2LYQ8IUE0 185 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 CORO2AQ92828 525 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 SLC39A9Q9NUM3 307 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
LDLRAD3-202ENST00000524419 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 NBEAQ8NFP9 2946 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 MBP02144 154 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 CXCL1P09341 107 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 HOXA5P20719 270 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 THBS3P49746 956 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 FGF8P55075 233 aaPredicted RBP11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 ERVFRD-1P60508 538 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 AARDQ4LEZ3 155 aa11.35□□□□□ -0.59
LDLRAD3-202ENST00000524419 CT45A1Q5HYN5 189 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms