RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 IGLV3-9A0A075B6K5 115 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 CENPXA8MT69 81 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ITGB1BP1O14713 200 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 PHYHO14832 338 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ZNF207O43670 478 aaKnown RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 SYNGR1O43759 233 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 CST4P01036 141 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ZNF250P15622 560 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 IVDP26440 423 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 MPIP34949 423 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 FOXA1P55317 472 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ADARB1P78563 741 aaKnown RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 PRSS8Q16651 343 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 CEACAM16Q2WEN9 425 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 SLC35D2Q76EJ3 337 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 COMMD6Q7Z4G1 85 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 SYS1Q8N2H4 156 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ZNF283Q8N7M2 679 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 COX18Q8N8Q8 333 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 CYB561A3Q8NBI2 242 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 LYPD6BQ8NI32 183 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ZNF563Q8TA94 476 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 GTF2H4Q92759 462 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ISOC2Q96AB3 205 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 NARS2Q96I59 477 aaKnown RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 TM2D3Q9BRN9 247 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 SLC19A3Q9BZV2 496 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 PIGUQ9H490 435 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 FGF20Q9NP95 211 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 OR2S2Q9NQN1 319 aa3.15□□□□□ -1.91
CPNE3-206ENST00000523469 MRM2Q9UI43 246 aaKnown RBP3.15□□□□□ -1.91
CPNE3-206ENST00000523469 TNCP24821 2201 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 A0A1B0GW15 77 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 UPK1AO00322 258 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 TOR1AO14656 332 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 NPFFO15130 113 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 EIF4E2O60573 245 aaKnown RBP3.14□□□□□ -1.91
CPNE3-206ENST00000523469 KCNK2O95069 426 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 UBL3O95164 117 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 IL3P08700 152 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 BGNP21810 368 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 CRISP1P54107 249 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 UBE2G2P60604 165 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 UBE2MP61081 183 aaKnown RBP3.14□□□□□ -1.91
CPNE3-206ENST00000523469 ARF6P62330 175 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 MXD1Q05195 221 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 DGCR6Q14129 220 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 GNA13Q14344 377 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 LRRC75BQ2VPJ9 315 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 SPRNQ5BIV9 151 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 TMPRSS11AQ6ZMR5 421 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 VMO1Q7Z5L0 202 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 SLC30A7Q8NEW0 376 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 CDC26Q8NHZ8 85 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 COQ8AQ8NI60 647 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 C15orf40Q8WUR7 153 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 DDIT4LQ96D03 193 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 RNF170Q96K19 258 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 EBPLQ9BY08 206 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 LINC00470Q9BZP3 86 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 BCL2L14Q9BZR8 327 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 ACER3Q9NUN7 267 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 MARCOQ9UEW3 520 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-206ENST00000523469 PUS1Q9Y606 427 aaKnown RBP eCLIP3.14□□□□□ -1.91
CPNE3-206ENST00000523469 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
CPNE3-206ENST00000523469 GNG14A0A1W2PPG7 69 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 SEC14L6B5MCN3 397 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 XRCC2O43543 280 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 BRI3O95415 125 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 PSMG1O95456 288 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 FADS2O95864 444 aaKnown RBP3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CYB5R3P00387 301 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CTRB1P17538 263 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 F2RP25116 425 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 HTR2CP28335 458 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 IL5RAQ01344 420 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 PRB3Q04118 309 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-206ENST00000523469 KLRD1Q13241 179 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 OR7A5Q15622 319 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 TNXAQ16473 311 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 TBC1D28Q2M2D7 210 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 RPEL1Q2QD12 228 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CDKL4Q5MAI5 379 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 C4orf22Q6V702 233 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 LINC00336Q6ZUF6 198 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CMTM1Q8IZ96 169 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 LGI3Q8N145 548 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CDRT4Q8N9R6 151 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 OR2Z1Q8NG97 314 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 C1orf54Q8WWF1 131 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 RORBQ92753 470 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 RMI2Q96E14 147 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CCDC42Q96M95 316 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 CDCA4Q9BXL8 241 aa3.13□□□□□ -1.91
CPNE3-206ENST00000523469 DERL2Q9GZP9 239 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms