RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NEURL2Q9BR09 285 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 DUSP21Q9H596 190 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 CEPT1Q9Y6K0 416 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 RAB27BO00194 218 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 FCGR3BO75015 233 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 TUSC2O75896 110 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 OR2A4O95047 310 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 RRASP10301 218 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 NFYAP23511 347 aaPredicted RBP11.67□□□□□ -0.54
MRPS28-209ENST00000522987 PSMA1P25786 263 aaKnown RBP11.67□□□□□ -0.54
MRPS28-209ENST00000522987 SSX1Q16384 188 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 TEX45Q8NA69 505 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 HIPK2Q9H2X6 1198 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
MRPS28-209ENST00000522987 ACTL6BO94805 426 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 TPPPO94811 219 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
MRPS28-209ENST00000522987 GPHA2Q96T91 129 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 ST6GALNAC5Q9BVH7 336 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 ACOT13Q9NPJ3 140 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 BIRC6Q9NR09 4857 aa11.66□□□□□ -0.54
MRPS28-209ENST00000522987 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 IFITM5A6NNB3 132 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 PDCD5O14737 125 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 OR2C1O95371 312 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 MYOD1P15172 320 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 CRHBPP24387 322 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 MECP2P51608 486 aaKnown RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 CDK10Q15131 360 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 KCTD9Q7L273 389 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 WDR89Q96FK6 387 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
MRPS28-209ENST00000522987 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
MRPS28-209ENST00000522987 DNAH1Q9P2D7 4330 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 BRI3O95415 125 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 RAB3BP20337 219 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 MYL9P24844 172 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 PSMD7P51665 324 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 C15orf32Q32M92 178 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 C22orf42Q6IC83 251 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 PRSS48Q7RTY5 328 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 NR2C2APQ86WQ0 139 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
MRPS28-209ENST00000522987 NUDCD2Q8WVJ2 157 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 SIGLEC8Q9NYZ4 499 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
MRPS28-209ENST00000522987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
MRPS28-209ENST00000522987 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 C2orf70A6NJV1 201 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 E7EUB6 86 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 REG1AP05451 166 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 FOLR2P14207 255 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 RAB6AP20340 208 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
MRPS28-209ENST00000522987 SSX9Q7RTT3 188 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 MMD2Q8IY49 270 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 TCTEX1D2Q8WW35 142 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 CNBD2Q96M20 576 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 SPIN2AQ99865 258 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 SPIN2BQ9BPZ2 258 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
MRPS28-209ENST00000522987 DPPA5A6NC42 116 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 TMEM235A6NFC5 223 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 NDUFB8O95169 186 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 CLEC19AQ6UXS0 136 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 ZNF367Q7RTV3 350 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 RBMX2Q9Y388 322 aaKnown RBP11.62□□□□□ -0.55
MRPS28-209ENST00000522987 PRELID3BQ9Y3B1 194 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
MRPS28-209ENST00000522987 TRAV1-2A0A0B4J238 106 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 A0A1B0GW64 132 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 TNFSF12O43508 249 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 AIREO43918 545 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 JTBO76095 146 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 FCER2P06734 321 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 IL6RP08887 468 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-209ENST00000522987 PTHLHP12272 177 aa11.61□□□□□ -0.55
MRPS28-209ENST00000522987 AREGP15514 252 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms