RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 USF3Q68DE3 2245 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 SMG1Q96Q15 3661 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 A0A075B6Q4 140 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 MEIKINA0A087WXM9 373 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TRGV10A0A0A0MS01 117 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TRBV6-6A0A0A6YYG2 114 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 A0A0A6YYH2 397 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 KBTBD11-OT1A0A1B0GTJ5 212 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 C5orf51A6NDU8 294 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 A6NJ64 397 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF729A6NN14 1252 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 SERPINE3A8MV23 424 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 C17orf98A8MV24 154 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 K7EQD1 137 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 MFNGO00587 321 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ORC5O43913 435 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 HPGDSO60760 199 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CLPXO76031 633 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 APOA1P02647 267 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 RBP4P02753 201 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 MELTFP08582 738 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CD3GP09693 182 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 HIST1H1DP16402 221 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CCL3L1P16619 93 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ELK1P19419 428 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 GZMHP20718 246 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 PRTN3P24158 256 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 DLX6P56179 175 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ARF6P62330 175 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 PITPNAQ00169 270 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ARFRP1Q13795 201 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 KIAA0141Q14154 515 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ATXN7L3Q14CW9 347 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 C17orf58Q2M2W7 97 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CDNFQ49AH0 187 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 LRRC37A5PQ49AS3 106 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 UBE2NLQ5JXB2 153 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 HACD4Q5VWC8 232 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 OR52W1Q6IF63 320 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 FAHD2BQ6P2I3 314 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ZNF880Q6PDB4 577 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TCF23Q7RTU1 214 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TRAPPC6BQ86SZ2 158 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 GAPTQ8N292 157 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 Q8N7P7 452 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TPRX1Q8N7U7 411 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 SAMD12Q8N8I0 201 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 PLPPR1Q8TBJ4 325 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CHPT1Q8WUD6 406 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 UPRTQ96BW1 309 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 FAHD2AQ96GK7 314 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ARHGAP5-AS1Q96IT6 56 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TBX15Q96SF7 602 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 ATP6V0BQ99437 205 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CMSS1Q9BQ75 279 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 NICN1Q9BSH3 213 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 CHCHD5Q9BSY4 110 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 SLIRPQ9GZT3 109 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 NXF2Q9GZY0 626 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 SIRPDQ9H106 197 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 AUNIPQ9H7T9 357 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 METTL8Q9H825 291 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 BATF3Q9NR55 127 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 RHBDL2Q9NX52 303 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 KCNIP1Q9NZI2 227 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 COMMD3Q9UBI1 195 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 AK3Q9UIJ7 227 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 KIF25Q9UIL4 384 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 TRAPPC2LQ9UL33 140 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 AUP1Q9Y679 476 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 LINC00312Q9Y6C7 94 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 PRRC2AP48634 2157 aaKnown RBP2.48□□□□□ -2.01
VPS13B-209ENST00000521559 HECTD1Q9ULT8 2610 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 FLNCQ14315 2725 aa2.48□□□□□ -2.01
VPS13B-209ENST00000521559 NAV2Q8IVL1 2488 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 BAHCC1Q9P281 2608 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 TRAV39A0A0B4J263 110 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 KLLNB2CW77 178 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 FAM25AB3EWG3 89 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 FAM25CB3EWG5 89 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 FAM25GB3EWG6 89 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 TRDCB7Z8K6 153 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 C12orf77C9JDV5 145 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 C15orf65H3BRN8 121 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 SSX5O60225 188 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 MMP23AO75900 390 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 NAPSAO96009 420 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 HLA-DQB1P01920 261 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 HBZP02008 142 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 EIF4EP06730 217 aaKnown RBP2.47□□□□□ -2.01
VPS13B-209ENST00000521559 IGHV1-8P0DP01 117 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 RCC1P18754 421 aaPredicted RBP2.47□□□□□ -2.01
VPS13B-209ENST00000521559 HNF1AP20823 631 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 DTYMKP23919 212 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 CDK2P24941 298 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 CD34P28906 385 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 PRSS3P35030 304 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 SRP14P37108 136 aaKnown RBP2.47□□□□□ -2.01
VPS13B-209ENST00000521559 TALDO1P37837 337 aa2.47□□□□□ -2.01
VPS13B-209ENST00000521559 GLP1RP43220 463 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms