RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 CRYM-AS1A6NIL9 109 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 RAMP3O60896 148 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 IGHG2P01859 326 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 IL6RP08887 468 aaPredicted RBP13.81□□□□□ -0.2
TRAM1-203ENST00000520700 RPA2P15927 270 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 COMPP49747 757 aaPredicted RBP13.81□□□□□ -0.2
TRAM1-203ENST00000520700 CCR6P51684 374 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 DHODHQ02127 395 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 FOXL1Q12952 345 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 VMA21Q3ZAQ7 101 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 LIN54Q6MZP7 749 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 MZT2BQ6NZ67 158 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 TMEM230Q96A57 120 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 SIGLEC9Q9Y336 463 aa13.81□□□□□ -0.2
TRAM1-203ENST00000520700 FGF2P09038 288 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 NQO2P16083 231 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 UCP1P25874 307 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 LPAR6P43657 344 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 UBE2MP61081 183 aaKnown RBP13.8□□□□□ -0.2
TRAM1-203ENST00000520700 TMEM128Q5BJH2 165 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 OR2B11Q5JQS5 317 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
TRAM1-203ENST00000520700 LINC01006Q8NI28 216 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 VSTM2AQ8TAG5 236 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 RHOVQ96L33 236 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 FBXL15Q9H469 300 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 NAA60Q9H7X0 242 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 BEX1Q9HBH7 125 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 METTL1Q9UBP6 276 aaKnown RBP13.8□□□□□ -0.2
TRAM1-203ENST00000520700 ZNF580Q9UK33 172 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 KCNIP3Q9Y2W7 256 aa13.8□□□□□ -0.2
TRAM1-203ENST00000520700 TEX13DA0A0J9YY54 714 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-203ENST00000520700 CLPSL1A2RUU4 121 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 SLC25A17O43808 307 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 PEX14O75381 377 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 SERPINE2P07093 398 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 ZNF562Q6V9R5 426 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 Q6ZS46 218 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 SLC25A42Q86VD7 318 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 PPP1R27Q86WC6 154 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 SGPP2Q8IWX5 399 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 ADAD2Q8NCV1 583 aaKnown RBP13.79□□□□□ -0.2
TRAM1-203ENST00000520700 OR4A5Q8NH83 315 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 OR2T6Q8NHC8 308 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 TP53RKQ96S44 253 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 C19orf24Q9BVV8 132 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 ALX4Q9H161 411 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-203ENST00000520700 PALMDQ9NP74 551 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 BET1LQ9NYM9 111 aa13.79□□□□□ -0.2
TRAM1-203ENST00000520700 KCNAB3O43448 404 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 S1PR2O95136 353 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 CDS2O95674 445 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 TCRBP04435 133 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-203ENST00000520700 DEFA1P59665 94 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 DEFA3P59666 94 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 MRGPRG-AS1Q2M3A8 158 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 CENPSQ8N2Z9 138 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 TMEM167AQ8TBQ9 72 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 TMEM222Q9H0R3 208 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 SERTAD4Q9NUC0 356 aa13.78□□□□□ -0.2
TRAM1-203ENST00000520700 IGHV7-81A0A0B4J1V7 117 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 FAM240BA0A1B0GVZ2 78 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 FCN1O00602 326 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 OR2A4O95047 310 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 IGKV1-39P01597 117 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 IGKV1D-39P04432 117 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 IGF1P05019 195 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 MECP2P51608 486 aaKnown RBP13.77□□□□□ -0.21
TRAM1-203ENST00000520700 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
TRAM1-203ENST00000520700 PRSS8Q16651 343 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 TMEM56Q96MV1 263 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 OR2A7Q96R45 310 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 WNT10AQ9GZT5 417 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 TMEM56-RWDD3S4R434 201 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 COL6A5A8TX70 2615 aa13.77□□□□□ -0.21
TRAM1-203ENST00000520700 PIGBOS1A0A0B4J2F0 54 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 CREBL2O60519 120 aaPredicted RBP13.76□□□□□ -0.21
TRAM1-203ENST00000520700 ATG12O94817 140 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 OR5AC1P0C628 307 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 AKR1C4P17516 323 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
TRAM1-203ENST00000520700 CX3CL1P78423 397 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 TMEM187Q14656 261 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 PLGLAQ15195 96 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 SLC35E3Q7Z769 313 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAM1-203ENST00000520700 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 SEC22AQ96IW7 307 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
TRAM1-203ENST00000520700 SH2D7A6NKC9 451 aaPredicted RBP13.75□□□□□ -0.21
TRAM1-203ENST00000520700 MARCH11A6NNE9 402 aa13.75□□□□□ -0.21
TRAM1-203ENST00000520700 KBTBD11O94819 623 aa13.75□□□□□ -0.21
TRAM1-203ENST00000520700 ANXA3P12429 323 aa13.75□□□□□ -0.21
TRAM1-203ENST00000520700 MDKP21741 143 aaPredicted RBP13.75□□□□□ -0.21
TRAM1-203ENST00000520700 MAS1LP35410 378 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms