RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	SSX9	Q7RTT3	188 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZNF429	Q86V71	674 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	VKORC1L1	Q8N0U8	176 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	ST6GALNAC3	Q8NDV1	305 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	OR4A16	Q8NH70	328 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	CCL17	Q92583	94 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	ADTRP	Q96IZ2	230 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	MS4A5	Q9H3V2	200 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	TMEM140	Q9NV12	185 aa		10.17	□□□□□ -0.78
SPIDR-210	ENST00000519362	ADGRG4	Q8IZF6	3080 aa		10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	SCAF4	O95104	1147 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	APOBEC3A	P31941	199 aa	Predicted RBP	10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	RPL31	P62899	125 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	ICAM4	Q14773	271 aa		10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	HFE	Q30201	348 aa		10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	AIFM2	Q9BRQ8	373 aa		10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	GAL3ST2	Q9H3Q3	398 aa		10.16	□□□□□ -0.78
SPIDR-210	ENST00000519362	TRAV3	A0A0B4J244	114 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	IFNA17	P01571	189 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	HSPB1	P04792	205 aa	Known RBP	10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	CD3E	P07766	207 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	SRP19	P09132	144 aa	Known RBP	10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	VDAC2	P45880	294 aa	Predicted RBP	10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	GNG10	P50151	68 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	POU2AF1	Q16633	256 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	HAGH	Q16775	308 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	SSX7	Q7RTT5	188 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	RCC1L	Q96I51	464 aa	Known RBP	10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362	NDRG3	Q9UGV2	375 aa		10.15	□□□□□ -0.78
SPIDR-210	ENST00000519362		B9A039	149 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	OR13C7	P0DN81	318 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	CHRNB4	P30926	498 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	KHDC3L	Q587J8	217 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	AWAT1	Q58HT5	328 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	SOHLH1	Q5JUK2	328 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	HEPN1	Q6WQI6	88 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	ETV3L	Q6ZN32	361 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	RHOV	Q96L33	236 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	DYNLRB1	Q9NP97	96 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	KAAG1	Q9UBP8	84 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	TLN1	Q9Y490	2541 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	PCNX1	Q96RV3	2341 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	LOC102723971	A0A1B0GUV8	181 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	C7orf77	A4D0Y5	90 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	C15orf61	A6NNL5	157 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	IGKV1D-33	P01593	117 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	IGKV1-33	P01594	117 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	IL6R	P08887	468 aa	Predicted RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	CT45A6	P0DMU7	189 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	CT45A5	P0DMU8	189 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	CT45A7	P0DMV0	189 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	DAO	P14920	347 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	PAX6	P26367	422 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	ERVFRD-1	P60508	538 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	RPS16	P62249	146 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	TMEM200B	Q69YZ2	307 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	ZNF787	Q6DD87	383 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	OR4A47	Q6IF82	309 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	ACSM6	Q6P461	480 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	LYPD2	Q6UXB3	125 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	RPP25L	Q8N5L8	163 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	LINC01560	Q8TB33	94 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	ZNF714	Q96N38	554 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	NPCDR1	Q9BY65	106 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	UNKL	Q9H9P5	680 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	SMCO4	Q9NRQ5	59 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	CTSZ	Q9UBR2	303 aa		10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	FOXA2	Q9Y261	457 aa	Predicted RBP	10.14	□□□□□ -0.79
SPIDR-210	ENST00000519362	HCFC1	P51610	2035 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	FAM90A27P	A6NNH2	459 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	PRSS46	E5RG02	174 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	CCL21	O00585	134 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	NDUFB3	O43676	98 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	PLAU	P00749	431 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	CCL3L1	P16619	93 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	FGF7	P21781	194 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	ELL	P55199	621 aa	Predicted RBP	10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	RPP30	P78346	268 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	PMS2P11	Q13670	270 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	LCN15	Q6UWW0	184 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	ZNF833P	Q6ZTB9	187 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	OR10G4	Q8NGN3	311 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	RXFP4	Q8TDU9	374 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	TMEM14B	Q9NUH8	114 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	TCF19	Q9Y242	345 aa		10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	TPR	P12270	2363 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-210	ENST00000519362	COLCA2	A8K830	154 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	SIAH2	O43255	324 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	GRN	P28799	593 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	TFF3	Q07654	80 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	LRRC10	Q5BKY1	277 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362		Q8N7P7	452 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	GGACT	Q9BVM4	153 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	TUBA4B	Q9H853	241 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	RPS10P5	Q9NQ39	176 aa		10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	HEYL	Q9NQ87	328 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	CISD1	Q9NZ45	108 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-210	ENST00000519362	ZNRD1	Q9P1U0	126 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms