RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 OR51J1Q9H342 316 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 PARP11Q9NR21 331 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 CCL28Q9NRJ3 127 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 EHFQ9NZC4 300 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 METTL1Q9UBP6 276 aaKnown RBP4.8□□□□□ -1.64
MRPS28-203ENST00000518371 EXTL2Q9UBQ6 330 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 RBMX2Q9Y388 322 aaKnown RBP4.8□□□□□ -1.64
MRPS28-203ENST00000518371 PRELID3BQ9Y3B1 194 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 TSSC4Q9Y5U2 329 aaPredicted RBP4.8□□□□□ -1.64
MRPS28-203ENST00000518371 WSB1Q9Y6I7 421 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 TENM1Q9UKZ4 2725 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 IGHV7-81A0A0B4J1V7 117 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TRAV41A0A0B4J266 112 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 IGKV1D-13A0A0B4J2D9 117 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 SULT1C2O00338 296 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 FCN1O00602 326 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 CTDSP2O14595 271 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 SLC25A17O43808 307 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 FCGR3BO75015 233 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 NDUFA3O95167 84 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 SPDEFO95238 335 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 CNIH1O95406 144 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 CRYZL1O95825 349 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 PPYP01298 95 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 HLA-DRB1P01911 266 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 IGKV1-16P04430 117 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 IGKV1-13P0DP09 117 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 PF4V1P10720 104 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 DUTP33316 252 aaKnown RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 RFX2P48378 723 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 CX3CL1P78423 397 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TMEM267Q0VDI3 215 aaPredicted RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 VMA21Q3ZAQ7 101 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TCTEX1D4Q5JR98 221 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 CXorf66Q5JRM2 361 aaPredicted RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TMEM65Q6PI78 240 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 DHRS11Q6UWP2 260 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 LYSMD2Q8IV50 215 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 OR6F1Q8NGZ6 308 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 GPX8Q8TED1 209 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 TCTEX1D2Q8WW35 142 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 SNAPC3Q92966 411 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 ISOC1Q96CN7 298 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 DIRAS2Q96HU8 199 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 HSD17B10Q99714 261 aaKnown RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF2Q9BSG1 426 aaPredicted RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 C6orf62Q9GZU0 229 aaPredicted RBP4.79□□□□□ -1.64
MRPS28-203ENST00000518371 ZFP57Q9NU63 452 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 A3GALT2U3KPV4 340 aa4.79□□□□□ -1.64
MRPS28-203ENST00000518371 LINC00473A8K010 186 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 G3V318 75 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 H3BMQ9 156 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ATP6V0E1O15342 81 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 TNFSF12O43508 249 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 TPPPO94811 219 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 CA2P00918 260 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 IFNA6P05013 189 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 IGF1P05019 195 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ELANEP08246 267 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 CD40LGP29965 261 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 RCVRNP35243 200 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 HRH1P35367 487 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 RPL23AP62750 156 aaKnown RBP4.78□□□□□ -1.64
MRPS28-203ENST00000518371 GNB1P62873 340 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
MRPS28-203ENST00000518371 CATR1Q13166 79 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 DYRK1AQ13627 763 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 FXYD3Q14802 87 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ECSCRQ19T08 205 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 OR2B11Q5JQS5 317 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF562Q6V9R5 426 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 KCTD9Q7L273 389 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 PPP1R27Q86WC6 154 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 TMEM17Q86X19 198 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 MCFD2Q8NI22 146 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
MRPS28-203ENST00000518371 DYNC2LI1Q8TCX1 351 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 DDB2Q92466 427 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 BORCS5Q969J3 196 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 C5orf30Q96GV9 206 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 TAS2R8Q9NYW2 309 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 CCDC59Q9P031 241 aaKnown RBP4.78□□□□□ -1.64
MRPS28-203ENST00000518371 KLK11Q9UBX7 282 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 ANAPC10Q9UM13 185 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 CEPT1Q9Y6K0 416 aa4.78□□□□□ -1.64
MRPS28-203ENST00000518371 A0A1W2PN81 502 aa4.77□□□□□ -1.65
MRPS28-203ENST00000518371 SRRM4A7MD48 611 aaKnown RBP4.77□□□□□ -1.65
MRPS28-203ENST00000518371 ACTL6BO94805 426 aa4.77□□□□□ -1.65
MRPS28-203ENST00000518371 HRASP01112 189 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms