RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TRAV8-1A0A0A6YYK1 113 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 C21orf140B9A014 251 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 LIN7AO14910 233 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 OR2T1O43869 369 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SHBGP04278 402 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ADORA1P30542 326 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 OR10J3Q5JRS4 329 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 FAM27BQ5VT28 67 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 C1orf174Q8IYL3 243 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 PACRGLQ8N7B6 248 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CCDC12Q8WUD4 166 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 RNASE6Q93091 150 aaKnown RBP-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 TLCD1Q96CP7 247 aa-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ZNF106Q9H2Y7 1883 aaKnown RBP-0.25□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SNRNP200O75643 2136 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 OR6C6A6NF89 314 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 C19orf84I3L1E1 186 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 MSMBP08118 114 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 NQO2P16083 231 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 MSNP26038 577 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 TMEM33P57088 247 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CIRBPQ14011 172 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ACSM3Q53FZ2 586 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 GDF5OSQ5U4N7 250 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 OR2Y1Q8NGV0 311 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ACOT12Q8WYK0 555 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CIDECQ96AQ7 238 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 LRRC39Q96DD0 335 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 TMEM70Q9BUB7 260 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KLK9Q9UKQ9 250 aa-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 BZW2Q9Y6E2 419 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ZNF462Q96JM2 2506 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KIF27Q86VH2 1401 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 A0A1B0GX12 115 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 IRGMA1A4Y4 181 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 FUOMA2VDF0 154 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 M0R381 172 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 PMP2P02689 132 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KRTAP2-3P0C7H8 128 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CFL1P23528 166 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ZNF93P35789 620 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 HAAOP46952 286 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 UBE2IP63279 158 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 TMEM267Q0VDI3 215 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 MESTQ5EB52 335 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 Q8N814 137 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 Q8WTZ3 238 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SMIM12Q96EX1 92 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KRTAP2-4Q9BYR9 128 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KRTAP2-1Q9BYU5 128 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ZNHIT6Q9NWK9 470 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 NXT1Q9UKK6 140 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CCDC88AQ3V6T2 1871 aa-0.27□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CEP192Q8TEP8 1941 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 TRBV10-2A0A0K0K1G8 114 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 A0A1B0GW15 77 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 RAB19A4D1S5 217 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 C9JCJ5 164 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 NCR3O14931 201 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 ASS1P00966 412 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 METTL15P1P0C7V9 234 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 PTNP21246 168 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SLCO1A2P46721 670 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 OR10A3P58181 314 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SNAP25P60880 206 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 FKBP1AP62942 108 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 RAB31Q13636 194 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 SPATA24Q86W54 205 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 CDRT4Q8N9R6 151 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 NCOR1P1Q9H4R4 102 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 E9PCH4 1651 aa-0.28□□□□□ -2.45
RNU6-1088P-201ENST00000516850 KIF24Q5T7B8 1368 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 ABCC12Q96J65 1359 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 A0A1B0GW54 56 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 F5H5K5 113 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 TFPTP0C1Z6 253 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 PTMSP20962 102 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 BRS3P32247 399 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 PSMD7P51665 324 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 NKAIN1Q4KMZ8 207 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 LCN8Q6JVE9 175 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 XKRXQ6PP77 449 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 LINC00471Q8N535 108 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 MITD1Q8WV92 249 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 TMEM208Q9BTX3 173 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 XAGE1AQ9HD64 81 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 MAT2BQ9NZL9 334 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 MCM3APO60318 1980 aa-0.29□□□□□ -2.46
RNU6-1088P-201ENST00000516850 KIAA0232Q92628 1395 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 COL4A5P29400 1685 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 TMEM269A0A1B0GVZ9 245 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 TRAPPC2LH3BP13 241 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 HYPMO75409 117 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 LDOC1O95751 146 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 LIMS3P0CW19 117 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 LIMS4P0CW20 117 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 H2BFSP57053 126 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 ZNF345Q14585 488 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 ZNF846Q147U1 533 aa-0.3□□□□□ -2.46
RNU6-1088P-201ENST00000516850 TMEM249Q2WGJ8 235 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms