RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 CIARTQ8N365 385 aaPredicted RBP10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 CFHR4Q92496 578 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 GSKIPQ9P0R6 139 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 ITGB1BP2Q9UKP3 347 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 WASHC3Q9Y3C0 194 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
SNCAIP-221ENST00000515215 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 J3QLI3 93 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 MPC2O95563 127 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 TGFAP01135 160 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 EPHA1P21709 976 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 PSMB6P28072 239 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 SAA4P35542 130 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 RAB13P51153 203 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 LGALS4P56470 323 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 RAB32Q13637 225 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 SMCO1Q147U7 214 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 LRRC37A5PQ49AS3 106 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 RNASE11Q8TAA1 199 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 OSR1Q8TAX0 266 aaPredicted RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 CACNG5Q9UF02 275 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 IGHV3-72A0A0B4J1Y9 119 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 TRAV40A0A0B4J280 105 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 H0YIZ8 118 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 H7C2Y5 167 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 TIMM23O14925 209 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 NPFFO15130 113 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 IL6RP08887 468 aaPredicted RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 PAX6P26367 422 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 EIF2B2P49770 351 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 NKX2-5P52952 324 aaPredicted RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 FGL1Q08830 312 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 SSX2Q16385 188 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 H2BFWTQ7Z2G1 175 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 MOB3BQ86TA1 216 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 VKORC1L1Q8N0U8 176 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 OR4C13Q8NGP0 309 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 FLYWCH2Q96CP2 140 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 MALSU1Q96EH3 234 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 RHOVQ96L33 236 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
SNCAIP-221ENST00000515215 HRASP01112 189 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 MBPP02686 304 aaPredicted RBP10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 IGHV4-38-2P0DP08 117 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 ERVK-16P61578 105 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 ID3Q02535 119 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 KLF17Q5JT82 389 aaPredicted RBP10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 CCDC144NLQ6NUI1 221 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 C11orf87Q6NUJ2 197 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 HARBI1Q96MB7 349 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
SNCAIP-221ENST00000515215 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 K7EPK0 472 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 SHOXO15266 292 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 IGLV2-23P01705 113 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 SLC25A4P12235 298 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 LYL1P12980 280 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 CD1BP29016 333 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 AARDQ4LEZ3 155 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 CXorf66Q5JRM2 361 aaPredicted RBP10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 RUSC1-AS1Q66K80 236 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 OR4A47Q6IF82 309 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 PUSL1Q8N0Z8 303 aaKnown RBP10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 FAM71E2Q8N5Q1 922 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 RITA1Q96K30 269 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 MS4A7Q9GZW8 240 aaPredicted RBP10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 TNCP24821 2201 aa10.08□□□□□ -0.8
SNCAIP-221ENST00000515215 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 TRAV3A0A0B4J244 114 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 VENTXO95231 258 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 SCGB1D2O95969 90 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 SAA1P0DJI8 122 aaPredicted RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 RELBQ01201 579 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 GPR157Q5UAW9 335 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 PRSS54Q6PEW0 395 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 OR1S1Q8NH92 325 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 AIFM2Q9BRQ8 373 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 OR5AC2Q9NZP5 309 aa10.07□□□□□ -0.8
SNCAIP-221ENST00000515215 MBD2Q9UBB5 411 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms