RNA–Protein interactions for RNA: ENST00000514376.1

CTD-3080P12.3-203, humanhuman

TSL 1 (best) BASIC

Gene CTD-3080P12.3, Length 1,757 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-203ENST00000514376 RITA1Q96K30 269 aa13.7□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 NSG2Q9Y328 171 aa13.7□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 AUP1Q9Y679 476 aa13.7□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TRAV3A0A0B4J244 114 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TXNL1O43396 289 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 KCNAB3O43448 404 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RRASP10301 218 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TMEM249Q2WGJ8 235 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RHOVQ96L33 236 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 PLSCR3Q9NRY6 295 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TMEM140Q9NV12 185 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RCL1Q9Y2P8 373 aaKnown RBP13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 AKAP9Q99996 3911 aa13.69□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TIMM23O14925 209 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ARPC5O15511 151 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 AVPP01185 164 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 LYL1P12980 280 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CEACAM3P40198 252 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 NKX2-1P43699 371 aaPredicted RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ERVK-16P61578 105 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 SSX2Q16385 188 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MINOS1Q5TGZ0 78 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 PRSS54Q6PEW0 395 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CIARTQ8N365 385 aaPredicted RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 THAP6Q8TBB0 222 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 HARBI1Q96MB7 349 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 FOXC2Q99958 501 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 POMT1Q9Y6A1 747 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MINOS1-NBL1R4GNA1 71 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 NPFFO15130 113 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 SHOXO15266 292 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 DEDDO75618 318 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CXCL2P19875 107 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MC5RP33032 325 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 SAA4P35542 130 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 LGALS4P56470 323 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 OR2B8PP59922 312 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ID3Q02535 119 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 POU2AF1Q16633 256 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 LGALSLQ3ZCW2 172 aaPredicted RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 OSR1Q8TAX0 266 aaPredicted RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CFHR4Q92496 578 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 FLYWCH2Q96CP2 140 aaKnown RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ZNF469Q96JG9 3925 aaPredicted RBP13.68□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ST8SIA3O43173 380 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 HRASP01112 189 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TGFAP01135 160 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RAB13P51153 203 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ZNF546Q86UE3 836 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 OR4C13Q8NGP0 309 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 DCUN1D4Q92564 292 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TNFSF18Q9UNG2 199 aa13.67□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 IGLV2-23P01705 113 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 IGHV1-69P01742 117 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 IL6RP08887 468 aaPredicted RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 SAA1P0DJI8 122 aaPredicted RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 GATA3P23771 443 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RPS16P62249 146 aaKnown RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RELBQ01201 579 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 TMEM65Q6PI78 240 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 OR8H3Q8N146 312 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MS4A7Q9GZW8 240 aaPredicted RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 C11orf1Q9H5F2 150 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 HSPB11Q9Y547 144 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 SSSCA1O60232 199 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 PET100P0DJ07 73 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 BRD3OSQ6XYD6 125 aa13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 PUSL1Q8N0Z8 303 aaKnown RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.66□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CCDC168Q8NDH2 2452 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 FAM90A9PA6NNJ1 464 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 VENTXO95231 258 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CD24P25063 80 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CNTFRP26992 372 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 KLF17Q5JT82 389 aaPredicted RBP13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 ITPR3Q14573 2671 aa13.65□□□□□ -0.22
CTD-3080P12.3-203ENST00000514376 CELSR1Q9NYQ6 3014 aa13.64□□□□□ -0.23
CTD-3080P12.3-203ENST00000514376 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
CTD-3080P12.3-203ENST00000514376 TMEM50AO95807 157 aa13.64□□□□□ -0.23
CTD-3080P12.3-203ENST00000514376 MALSU1Q96EH3 234 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms